Gene Rpic12D_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1982 
SymbolmgsA 
ID8019642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2106449 
End bp2106880 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID644830768 
Productmethylglyoxal synthase 
Protein accessionYP_002981934 
Protein GI241663574 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID[TIGR00160] methylglyoxal synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC TTACGCCCGA AAGCGCAGTC CGCAAACGCC GTGTCGCACT GATCGCACAC 
GACCACAAAA AAGATGACAT GGTCGCTTTC GCCCAAACGC ACCAGGCCTT CCTGTCGCAA
TGCGACTTGC TGGCGACCGG CACCACGGGT GGCCGCCTGG AGAAGGAAGT CGGCCTGACC
GTGCAGCGCA TGCTGTCCGG CCCGTGGGGC GGCGACTTAC AGATTGGCGC GCAGTTGGCC
GAAGGCCGTG TCGACGCCGT CATCTTCCTG CGCGACCCGA TGACGCCGCA ACCGCACGAA
CCTGATATAA ACGCGCTGGT CCGCGCCTGC GACGTCCACA ACATTCCCTG CGCCACCAAC
CTGGCCACCG CCGACCTGGT GATGTCGGCC CTGCAACGGG TGGCGCCTGA TCCGAAGGAG
ATTCACGCAT GA
 
Protein sequence
MTTLTPESAV RKRRVALIAH DHKKDDMVAF AQTHQAFLSQ CDLLATGTTG GRLEKEVGLT 
VQRMLSGPWG GDLQIGAQLA EGRVDAVIFL RDPMTPQPHE PDINALVRAC DVHNIPCATN
LATADLVMSA LQRVAPDPKE IHA