Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1978 |
Symbol | |
ID | 8019638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2102844 |
End bp | 2103764 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830764 |
Product | inner-membrane translocator |
Protein accession | YP_002981930 |
Protein GI | 241663570 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTC TCGCTCCCCT GATCGCCGCG TCGATCAACG CCGGCACCCC GCTGCTGCTG GCCGCCCTGG GCCTCTTGAT GAACGAGCGC TCCGGCGTGC TCAACCTCGG CGCGGAAGGC ATGATGCTGG TGGCCGCCGT GGTTGGTTTC ATGGTCGGCT ACCAGACGCA GATTCCGCTG CTGGGCTTTG CTGCCGGTGC GATTGCAGGC ATGGTGATGG CGGCCCTGTT TGCATGGCTC GCGCTGGTGC TCGTCACCAA CCAGGTCGCC ACGGGCCTCG CCCTGTCGAT TTTCGGCACC GGCCTGTCGG CCTTCATGGG CCAGCGCTTT GTCGGCATGT CGCTGCCGGC GCAGGCGCAC GGCATCCCCG GGTTGGAGTC GATTCCGTTT GTCGGCCCCG CCCTGTTCGC GCACCACTGG ATGGTCTATT TCAGCCTGCT GCTGTGCGGC GCGATTGCGT GGTTCCTGTT CAAGACGCGG GCTGGCCTCA CGCTGCGGGC GATTGGGGAA TCGCCGGAGT CGGCTCACGC GCTCGGCTAT CCGGTACGCA CCGTCCGCTT TGGCGCGCTG TTGTTTGGCG GCGCGTGCTG CGGGCTGGCA GGTGCCTACC TGTCGCTGGT CTACACGCCG ATGTGGGTCG AGAACATGGT CGCCGGCCGC GGCTGGATTG CCCTCGCGCT GACCACCTTT GCCACTTGGC GCCCGCTACG CATCCTGTTC GGTGCGCTGC TCTTCGGCGG CGTGACGATC CTGCAATTTC ACCTGCAAGG GATGGGCGTG TCGGTGCCGT CGCAGATCCT GTCGATGGCG CCGTTTGCCG CCACCATCGT CGTGCTGGCC ATCATCTCGC GCAATCCGGA TTGGATCCGC CTGAACATGC CCGCATCGCT CGGCAAGCCG TTCCGCCCGG GGGCTGCCTA A
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Protein sequence | MESLAPLIAA SINAGTPLLL AALGLLMNER SGVLNLGAEG MMLVAAVVGF MVGYQTQIPL LGFAAGAIAG MVMAALFAWL ALVLVTNQVA TGLALSIFGT GLSAFMGQRF VGMSLPAQAH GIPGLESIPF VGPALFAHHW MVYFSLLLCG AIAWFLFKTR AGLTLRAIGE SPESAHALGY PVRTVRFGAL LFGGACCGLA GAYLSLVYTP MWVENMVAGR GWIALALTTF ATWRPLRILF GALLFGGVTI LQFHLQGMGV SVPSQILSMA PFAATIVVLA IISRNPDWIR LNMPASLGKP FRPGAA
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