Gene Rpic12D_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1976 
Symbol 
ID8019636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2100178 
End bp2101728 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content67% 
IMG OID644830762 
ProductABC transporter related 
Protein accessionYP_002981928 
Protein GI241663568 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCAC TCCCACCACG CCTGTCCCTG ACGGGCATGA CCAAGCGCTA CCCGAGCGTG 
GTCGCCAACG ACGGCGTGAG CCTCACGGTC GCGCCGGGCG AGATCCACGC CGTGCTCGGC
GAAAACGGCG CCGGCAAGTC GACGCTGATG AAGATCATCT TCGGCGCCGT GCAGCCTGAC
GCCGGCGAGA TGAAGCTCGA CGGCCAACGG GTCGAGATTG CCAACCCGCA CCAGGCGCGA
TCGTTGGGTA TCGCCATGGT GTTCCAGCAC TTCTCGCTGT TCGACACGTT GACGGTGGCG
GAGAACATCC TGCTCGGCCT GCCCGCCGGC ACCGATCTGC GCGACGTGGC TGATCAGGTG
CGCAGCACGG GCGAGAGGTA TGGCCTGCCG CTGGAGCCGC ATCGCCATGT GCATACCCTG
TCGGTGGGCG AGCGCCAGCG CGTGGAAATC GTGCGCGCGC TGCTCACCAA GCCGCGTCTG
CTGATCCTTG ACGAGCCGAC CTCGGTGCTG ACACCGCAGG CGGTCGAAAA GCTTTTCGTG
ACGCTGCGCC AGTTGGCGGC AGAAGGCACG AGCATCCTCT ACATCAGCCA CAAGCTCGAC
GAGATTCAGG CCCTGTGCCA CACCGCCACG GTGATGCGCA TGGGCAAGGT CACGGGCGTG
TGTGACCCGC GCCAGGAAAC GGCGGCATCG CTGTCGCGCA TGATGATCGG CGGCGAGCCT
CCGCGCGAAT TGCGCCCGCA GACCACGCCG GGCGAGGTGC GCATGGAAGT GGCTGGCCTG
TCGCTGCCCA AGGCACATGC CTTTGCGACG GAGCTGCATG ACATCGCATT GCAGCTGCGC
AGCGGCGAGA TCGTCGGCAT CGCAGGCGTA TCGGGCAACG GGCAGCAGGA ACTGCTGGCA
GCCCTGTCCG GCGAAGACAC CCGCGCGGCG GCACAGACCA TCAGCATCGG CAACGAGCCG
GTCGCCAAGC TGGACCCGCG GGCGCGCCGC AAGCGCGGGC TGTCGTTCGT GCCGGAAGAG
CGCCTGGGGC GCGGTGCCGT GCCATCGCTG TCGCTGGCCG CCAATACGCT GTTGACGCAT
CAACGTGCGC CACACGTGCG TGGCGGGCTC ATCGACAAGA AAGCCGCCGC CAAGCTGGCT
ACCGCCATCA TCAGCCGGTT TGGCGTGAAG GCTGGCGGCC CCGACGCGTT GGCCAAGAGC
CTGTCGGGCG GCAACCTGCA GAAATTCATC GTCGGCCGCG AAATCGAATG CGCGCCGCGC
GTGCTCATCG TCGCGCAACC CACCTGGGGC GTCGACGTGG GTGCGGCGGC GCAGATCCAC
AACGAAATCC TAGCGCTCAA GGCAGGGGGC TGCGCCATCC TGATCGTGTC GGAAGAACTC
GACGAACTCT TTGCGCTGTG CGATCGCCTG CACGTGATCG CCAACGGGCG CCTCTCCCCC
TCGACGCCCA CGCACGCCAC CGACCGCGAA CAGATCGGCC TGTGGATGAG CGGCATGTGG
GACAAGGCCC CGGTTTCAAC CGCAGCAAGC TCGGAGGTGG CCCATGGCTG A
 
Protein sequence
MTPLPPRLSL TGMTKRYPSV VANDGVSLTV APGEIHAVLG ENGAGKSTLM KIIFGAVQPD 
AGEMKLDGQR VEIANPHQAR SLGIAMVFQH FSLFDTLTVA ENILLGLPAG TDLRDVADQV
RSTGERYGLP LEPHRHVHTL SVGERQRVEI VRALLTKPRL LILDEPTSVL TPQAVEKLFV
TLRQLAAEGT SILYISHKLD EIQALCHTAT VMRMGKVTGV CDPRQETAAS LSRMMIGGEP
PRELRPQTTP GEVRMEVAGL SLPKAHAFAT ELHDIALQLR SGEIVGIAGV SGNGQQELLA
ALSGEDTRAA AQTISIGNEP VAKLDPRARR KRGLSFVPEE RLGRGAVPSL SLAANTLLTH
QRAPHVRGGL IDKKAAAKLA TAIISRFGVK AGGPDALAKS LSGGNLQKFI VGREIECAPR
VLIVAQPTWG VDVGAAAQIH NEILALKAGG CAILIVSEEL DELFALCDRL HVIANGRLSP
STPTHATDRE QIGLWMSGMW DKAPVSTAAS SEVAHG