Gene Rpic12D_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1973 
Symbol 
ID8019633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2096550 
End bp2097596 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID644830759 
Producturea amidolyase related protein 
Protein accessionYP_002981925 
Protein GI241663565 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC CCCTACCCAT GATCGAAATC GTGCGGGCCG GCGTGCTGGC GTCCGTGCAG 
GACCTGGGCC GCACCGGCTA TCGCCGTTTT GGCGTGTGCA CGTCGGGCGC GCTGGATCCG
CTGTCGCTGT ATGTGGGCAA CCGCCTGGTC GGCAACCGCA GCGACGCGGC GGGCATCGAA
TTCACGCTGG GCAACGCCAC GCTGCGCTTC CACGCCAATG GCCTGATCGC GCTGACGGGC
GCCGATTGCC GGGCCACGCT CGATGGCGCA CCGGTGCATG CGTGGCGCGC CATCCCTGTG
CAACGCGGGC AGATGCTGAC CTTGCGGGTG GCGCAGGGCG GGGTGCGTGC GTATCTCTGC
GTGGCCGGCG GCATCGATGT GCCCGAGATG ATGGGCTCGC GCAGCACCGA TCTGAAGGCC
GGCTTTGGCG GTTTCGAAGG GCGCCCGCTG AAAGATGGCG ACAGGCTGCC CGTGCTGCCT
GCCGACACAA CGTACGCCCC CGACATCAGC GGCGATACCG TTGCCGTAAA GGCCGCCCGC
TGGACGTTCG ACCGCGCGCA GAAGGACACG CCGGTCATGC GCGTGCTGCC CGGTCCTGAA
TACGACGATT TCGTTGCCGA CGCGCAAGCC GCCTTCTGGG AATCGGACTG GACACTCACG
CCCAACAGCA ACCGCATGGG TTTTCGCCTG CAGGGGCCGG AACTCAAGCG CAAGAAGCAG
CGCAGCGGCG ATCTGCTCTC GCACGGCGTG GTGCCGGGCG TGATCCAGGT GCCGCCGTCT
GGCCAGCCCA TTGTGCTGAT GGCCGATGCG CAAACCACGG GCGGCTATCC GAAGATCGGC
TCCGTCATCC TGGCCGACCA ATGGCGCCTG GCGCAGATTC CGCTCGGCAC GCGCGTGCGC
TTCGAGCGTG TCACGCTGGA AGAGGCCGAA GCCGCCCGTG CCGACGTGGC ACGGTATCTG
CAGCAAATCG AAACCGCGCT GGATTGGCAG CGCCAAGGCA TTCTGTCGAG CGCGCATCGC
ATCGCCAAGA CGCGACTGAA TGCCTGA
 
Protein sequence
MTKPLPMIEI VRAGVLASVQ DLGRTGYRRF GVCTSGALDP LSLYVGNRLV GNRSDAAGIE 
FTLGNATLRF HANGLIALTG ADCRATLDGA PVHAWRAIPV QRGQMLTLRV AQGGVRAYLC
VAGGIDVPEM MGSRSTDLKA GFGGFEGRPL KDGDRLPVLP ADTTYAPDIS GDTVAVKAAR
WTFDRAQKDT PVMRVLPGPE YDDFVADAQA AFWESDWTLT PNSNRMGFRL QGPELKRKKQ
RSGDLLSHGV VPGVIQVPPS GQPIVLMADA QTTGGYPKIG SVILADQWRL AQIPLGTRVR
FERVTLEEAE AARADVARYL QQIETALDWQ RQGILSSAHR IAKTRLNA