| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1958 |
|---|
| Symbol | |
|---|
| ID | 8019617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2083055 |
|---|
| End bp | 2084080 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644830743 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_002981910 |
|---|
| Protein GI | 241663550 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.023746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.247779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGT CAAAAGGCTC AGGACAGCCA CGCAGTGCCC CGTTGCCGGT GGGCACCTTG
CTGTCCAATT ATCGTATTGT AAAGAAGTTG GCCAGCGGGG GGTTCAGCTT CGTCTATCTT
GCGACCGACG AGCATGGGAC GCCGGTGGCC GTGAAGGAAT ATCTGCCGTC TTCGCTGGCC
CGTCGTGCGC CCGGCGAATT GATTCCCGTC GTGCCTGAAG AAAGCGCGAG CGCGTTCCGC
CTCGGGCTCA AATACTTCTT TGAAGAAGGC CGGTCGCTGG CCAAGATTTC TCACCCTGCC
ATCGTGCGAG TGCTCAATTT CTTCCGGGAA AACGGCACCG TCTACATGGT GATGACGTAC
GAGCAGGGTA AAACGCTGCA AGAACACATC CTCACAGCGC GCCAGCAAGG CAAGCTGAAG
ATGCTGCGCG AGCGCTTCAT CCGCCAGGTG TTCCATGACC TGATGAGCGG GCTGCGCGAG
GTCCACATCC ACAAGCTGCT GCACCTCGAC ATCAAGCCCG GCAACATTTA CCTGCGCGAG
GATTTCTCGC CGATCCTGCT CGACTTCGGT GCCGCACGGC AGACGCTCAC TGCCGAGGCC
TCGCGCTTCC AGCCGATGTA CACGCCGGGC TTTGCCGCGC CGGAGCTGTA CCGCAAGCAC
AACGAGTTGG GCCCGTGGAC GGACATCTAC AGCATCGGCG CCACGATCTA TGCCTGCATG
GCCGGCACGC CGCCGCAGGA AGCCACGCAG CGCGAGAAAG ACGACAAGCT GGAAGAAGGC
CTGGAGCGCC TGCGCAAGGT CTATACAGCC AGCCTCATCG ATCTGGTCGG CTGGTGTCTG
AAGATGAAGC CCGAAGAGCG CCCCCAGAGC GTGTTCCGTC TGCAAAAGGT GCTGCGCGAA
GAAAGCAACG CGCTGACCGA ATTGCAAGCA CTGACGGCGG TCACCCAGGG TGGGCCGGTG
TCAGAGGAAA AAGAGGCGTT GACGACGCGT TTCATGAGCC GTCTGTTGCG CCGCCGGGAC
AGTTGA
|
|---|
| Protein sequence | MTESKGSGQP RSAPLPVGTL LSNYRIVKKL ASGGFSFVYL ATDEHGTPVA VKEYLPSSLA
RRAPGELIPV VPEESASAFR LGLKYFFEEG RSLAKISHPA IVRVLNFFRE NGTVYMVMTY
EQGKTLQEHI LTARQQGKLK MLRERFIRQV FHDLMSGLRE VHIHKLLHLD IKPGNIYLRE
DFSPILLDFG AARQTLTAEA SRFQPMYTPG FAAPELYRKH NELGPWTDIY SIGATIYACM
AGTPPQEATQ REKDDKLEEG LERLRKVYTA SLIDLVGWCL KMKPEERPQS VFRLQKVLRE
ESNALTELQA LTAVTQGGPV SEEKEALTTR FMSRLLRRRD S
|
|---|
| |