Gene Rpic12D_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1876 
Symbol 
ID8019532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1992942 
End bp1993553 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID644830659 
ProductNUDIX hydrolase 
Protein accessionYP_002981829 
Protein GI241663469 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.765348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC ACACCCCGCT GAACGAAACC TCTGAGACTG CGCAGGACTC GGACGCCGAC 
CTGCGCGAGA CGCAGGTGGC ATCTGCGCTG ATGCACCAAG GTAAATTCCT CACGCTCAAG
CAGGACATCG TTCGGCTGCC GGACGGCCGA AATGCTAGCC GCGAATATCT GGTTCATCCG
GGCGCGGTGA TGATGATTCC GCTGTTCGAC GATGGCACTG TGCTGATGGA GCGCCAGTTT
CGCTATCCAG TCGACAGGGT GATGATTGAA TTCCCTGCCG GCAAGCTCGA TCCGCAGGAA
GGGGCGCTCG CGTGCGGCAA GCGCGAGCTG CGCGAGGAAA CCGGTTACAC GGCCGAGCGC
TGGGACTACC TCACGCGCAT CCATCCGGTC ATTTCATATT CCACCGAGTT CATCGATATT
TATCTCGCAC GGGATCTCAA GCAAGGGGAG GCGATGCTGG ATGAAGGCGA ATTCCTCGAG
ACCTTTATCA CGTCCGCCGG TCAACTCATC GATTGGGTGC GCGATGGCAA AATTTCGGAC
GTGAAGACCA TCATCGGTAC GTTCTGGCTC GAGAAGATCC TGTCGGGCGC CTGGACGCCA
GGTGCAGCCT AA
 
Protein sequence
MSDHTPLNET SETAQDSDAD LRETQVASAL MHQGKFLTLK QDIVRLPDGR NASREYLVHP 
GAVMMIPLFD DGTVLMERQF RYPVDRVMIE FPAGKLDPQE GALACGKREL REETGYTAER
WDYLTRIHPV ISYSTEFIDI YLARDLKQGE AMLDEGEFLE TFITSAGQLI DWVRDGKISD
VKTIIGTFWL EKILSGAWTP GAA