Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1876 |
Symbol | |
ID | 8019532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1992942 |
End bp | 1993553 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644830659 |
Product | NUDIX hydrolase |
Protein accession | YP_002981829 |
Protein GI | 241663469 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.765348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.48572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC ACACCCCGCT GAACGAAACC TCTGAGACTG CGCAGGACTC GGACGCCGAC CTGCGCGAGA CGCAGGTGGC ATCTGCGCTG ATGCACCAAG GTAAATTCCT CACGCTCAAG CAGGACATCG TTCGGCTGCC GGACGGCCGA AATGCTAGCC GCGAATATCT GGTTCATCCG GGCGCGGTGA TGATGATTCC GCTGTTCGAC GATGGCACTG TGCTGATGGA GCGCCAGTTT CGCTATCCAG TCGACAGGGT GATGATTGAA TTCCCTGCCG GCAAGCTCGA TCCGCAGGAA GGGGCGCTCG CGTGCGGCAA GCGCGAGCTG CGCGAGGAAA CCGGTTACAC GGCCGAGCGC TGGGACTACC TCACGCGCAT CCATCCGGTC ATTTCATATT CCACCGAGTT CATCGATATT TATCTCGCAC GGGATCTCAA GCAAGGGGAG GCGATGCTGG ATGAAGGCGA ATTCCTCGAG ACCTTTATCA CGTCCGCCGG TCAACTCATC GATTGGGTGC GCGATGGCAA AATTTCGGAC GTGAAGACCA TCATCGGTAC GTTCTGGCTC GAGAAGATCC TGTCGGGCGC CTGGACGCCA GGTGCAGCCT AA
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Protein sequence | MSDHTPLNET SETAQDSDAD LRETQVASAL MHQGKFLTLK QDIVRLPDGR NASREYLVHP GAVMMIPLFD DGTVLMERQF RYPVDRVMIE FPAGKLDPQE GALACGKREL REETGYTAER WDYLTRIHPV ISYSTEFIDI YLARDLKQGE AMLDEGEFLE TFITSAGQLI DWVRDGKISD VKTIIGTFWL EKILSGAWTP GAA
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