Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1765 |
Symbol | |
ID | 8019420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1880574 |
End bp | 1882466 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644830548 |
Product | Bile acid-CoA:amino acid N-acyltransferase |
Protein accession | YP_002981719 |
Protein GI | 241663359 |
COG category | [S] Function unknown |
COG ID | [COG4950] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.353872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.310318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACGT TCGCGCTCGG CGTCACGCCA ACAGACGACC TGATCGACGT ATCGCGCAGC ATCGTCGTGA CGGGGCTTGC GCCCGGCGCG CAGGTCGGCA TCGTGGCGCA AACGCGTCGC GGCAATGGCG TGCTGTGGCA CAGCCGTGCC GCATTCGTTG CGGATGCGCA AGGCACCGTC GACCTCACGC GCGACGCGCC TGTCTCGGGT GACTACACCG GCGTCAGCGC GATGGGCGTC ATCTGGAGCC AACGGCCGGA AGACGGCAAG GCGCGCGAGG TGTTTCCGCA GCCTGCCACG GAGCCGCTGA CGACCACGCT GACGGCCACG GCCAACGGCG AGTCGATCCA TGCGCGCTTC GTCCAACGGC TGGCCGCACC TGGCGTGACG CGCCACGATG TGCGCGCACC GGAGAATGAG CACGGTCTGG TCGGCACGCT GTACCTGCCC GATCCGTATG CGCACCCGGG GCCCCGCCCT GCCGTGCTGA TCCTCAACGG CTCGGGCGGC GGCATCAACG AGCCACGCGC GGCGCTGTAT GCCTCGCATG GCTATGCGGC GTTTGCGCTG GCCTATTTCA AGGCGCCGGG GCTGTCGGAC TGCATCTCGA ATACGCCACT CGAATATTTC GAGCGCGCGC TTGCCTGGCT GCGCAAACGC GTGGAGCCGC TGCACGACTT CGTTGCCGTG AGCGGCCAGT CACGCGGCGG TGAACTGGCA TTGCTGCTGG GCGCGACGTT CCCGGAAGCG GTATCTGCGG TCATCGGTTA CGTGCCGGGC GCCGTCGTGC ACAGCGGGCA GAACGCCGCC GCCCCCGCTG TCGGCCGCGA AGGCCCCACG TGGCTGTATC GAGGTCAGCC GCTGCCGCAT CTGTGGGAAG GCAACCGCAC GGCGACCTGG GCACCGTTCG ACGAAGGCCC CGCGCCGCAT CGGCATGAAC GCGCCATCCG CACCGCGCTG CAGGATGCAG ACGCGGTGGC GCGCGCTCGC ATTCGCATCG AACGCGCGCG GGGGCCGGTG CTGCTGCTTT CCGCCTCCGA TGATGGCTCG TGGCCCTCGA GCGACTACTC GCGCATGGTG ACGACCAAAC TGGCCGAGGT ACGCCACCCC TACCCCGTCC AACATTTCGA CTATGAAGGC GCGGGTCACG CCATCGTCTT CCCATACGTG CCGACCACGC AGCTCGTCTA TGCGCATCCG GTGTCGGGCC GCATCAGCAC CGGCGGTGGC GAGCCGCGTG CCAACGCCCG CGCCGACGCC CAGTCGTGGG CAGCAGTGCT TCGCTTCCTC GCCAGCGCGG TGGCCGCGCG CGGCGCGTCC GTACCCGATT CCCGGAGCCT TTCATCAATG GATTTCACGC CCGCACACGA TGTGGTCGAC CAGATTGCCG GCCTGGAAGA CGGCAGCGCC ACGCATGCGC TGCGCCATGC CCGCGAAAAG GTGGCCACGG CCACGCAGGG CAGCTACGAC GCATTGTTCG ATGCAGACCT GCCCGGCCTG ACGTTGGGCG AACGCCTGCT CGTCGCGCTC TATGCCTGCC GCCTCACCCC GGCGCCCGAA CTGGCCGAAC ACTACCGCGC GCGCCTCGCG AATACGCCGG TCGACGCAGA TGCCCTGCAA GCCGTCGACC ACGGCGATAT CGACACGCTG ACCGACACCC GCCTGCGTGC CATCCTCGCC TTCACGCGCA CGCTCGTCGA ACGCCCCATC GAGGGCGACC GCGATGCGCT GTTGCGATTG CCCGCGGCGG GCCTGGCCAC GGCCGACGTC GTGACGCTCG CGCAGCTCAT CGCCTTTCTG TCGTATCAGA CGCGGCTCGT CGCCGGCTTG CGCGCCCTTC GCGAAGCCGC CGGCAGCGGC AGCGCCACCG CCTCCACCGA GACCGCAGCA TGA
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Protein sequence | MGTFALGVTP TDDLIDVSRS IVVTGLAPGA QVGIVAQTRR GNGVLWHSRA AFVADAQGTV DLTRDAPVSG DYTGVSAMGV IWSQRPEDGK AREVFPQPAT EPLTTTLTAT ANGESIHARF VQRLAAPGVT RHDVRAPENE HGLVGTLYLP DPYAHPGPRP AVLILNGSGG GINEPRAALY ASHGYAAFAL AYFKAPGLSD CISNTPLEYF ERALAWLRKR VEPLHDFVAV SGQSRGGELA LLLGATFPEA VSAVIGYVPG AVVHSGQNAA APAVGREGPT WLYRGQPLPH LWEGNRTATW APFDEGPAPH RHERAIRTAL QDADAVARAR IRIERARGPV LLLSASDDGS WPSSDYSRMV TTKLAEVRHP YPVQHFDYEG AGHAIVFPYV PTTQLVYAHP VSGRISTGGG EPRANARADA QSWAAVLRFL ASAVAARGAS VPDSRSLSSM DFTPAHDVVD QIAGLEDGSA THALRHAREK VATATQGSYD ALFDADLPGL TLGERLLVAL YACRLTPAPE LAEHYRARLA NTPVDADALQ AVDHGDIDTL TDTRLRAILA FTRTLVERPI EGDRDALLRL PAAGLATADV VTLAQLIAFL SYQTRLVAGL RALREAAGSG SATASTETAA
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