Gene Rpic12D_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1765 
Symbol 
ID8019420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1880574 
End bp1882466 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content69% 
IMG OID644830548 
ProductBile acid-CoA:amino acid N-acyltransferase 
Protein accessionYP_002981719 
Protein GI241663359 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.353872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.310318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACGT TCGCGCTCGG CGTCACGCCA ACAGACGACC TGATCGACGT ATCGCGCAGC 
ATCGTCGTGA CGGGGCTTGC GCCCGGCGCG CAGGTCGGCA TCGTGGCGCA AACGCGTCGC
GGCAATGGCG TGCTGTGGCA CAGCCGTGCC GCATTCGTTG CGGATGCGCA AGGCACCGTC
GACCTCACGC GCGACGCGCC TGTCTCGGGT GACTACACCG GCGTCAGCGC GATGGGCGTC
ATCTGGAGCC AACGGCCGGA AGACGGCAAG GCGCGCGAGG TGTTTCCGCA GCCTGCCACG
GAGCCGCTGA CGACCACGCT GACGGCCACG GCCAACGGCG AGTCGATCCA TGCGCGCTTC
GTCCAACGGC TGGCCGCACC TGGCGTGACG CGCCACGATG TGCGCGCACC GGAGAATGAG
CACGGTCTGG TCGGCACGCT GTACCTGCCC GATCCGTATG CGCACCCGGG GCCCCGCCCT
GCCGTGCTGA TCCTCAACGG CTCGGGCGGC GGCATCAACG AGCCACGCGC GGCGCTGTAT
GCCTCGCATG GCTATGCGGC GTTTGCGCTG GCCTATTTCA AGGCGCCGGG GCTGTCGGAC
TGCATCTCGA ATACGCCACT CGAATATTTC GAGCGCGCGC TTGCCTGGCT GCGCAAACGC
GTGGAGCCGC TGCACGACTT CGTTGCCGTG AGCGGCCAGT CACGCGGCGG TGAACTGGCA
TTGCTGCTGG GCGCGACGTT CCCGGAAGCG GTATCTGCGG TCATCGGTTA CGTGCCGGGC
GCCGTCGTGC ACAGCGGGCA GAACGCCGCC GCCCCCGCTG TCGGCCGCGA AGGCCCCACG
TGGCTGTATC GAGGTCAGCC GCTGCCGCAT CTGTGGGAAG GCAACCGCAC GGCGACCTGG
GCACCGTTCG ACGAAGGCCC CGCGCCGCAT CGGCATGAAC GCGCCATCCG CACCGCGCTG
CAGGATGCAG ACGCGGTGGC GCGCGCTCGC ATTCGCATCG AACGCGCGCG GGGGCCGGTG
CTGCTGCTTT CCGCCTCCGA TGATGGCTCG TGGCCCTCGA GCGACTACTC GCGCATGGTG
ACGACCAAAC TGGCCGAGGT ACGCCACCCC TACCCCGTCC AACATTTCGA CTATGAAGGC
GCGGGTCACG CCATCGTCTT CCCATACGTG CCGACCACGC AGCTCGTCTA TGCGCATCCG
GTGTCGGGCC GCATCAGCAC CGGCGGTGGC GAGCCGCGTG CCAACGCCCG CGCCGACGCC
CAGTCGTGGG CAGCAGTGCT TCGCTTCCTC GCCAGCGCGG TGGCCGCGCG CGGCGCGTCC
GTACCCGATT CCCGGAGCCT TTCATCAATG GATTTCACGC CCGCACACGA TGTGGTCGAC
CAGATTGCCG GCCTGGAAGA CGGCAGCGCC ACGCATGCGC TGCGCCATGC CCGCGAAAAG
GTGGCCACGG CCACGCAGGG CAGCTACGAC GCATTGTTCG ATGCAGACCT GCCCGGCCTG
ACGTTGGGCG AACGCCTGCT CGTCGCGCTC TATGCCTGCC GCCTCACCCC GGCGCCCGAA
CTGGCCGAAC ACTACCGCGC GCGCCTCGCG AATACGCCGG TCGACGCAGA TGCCCTGCAA
GCCGTCGACC ACGGCGATAT CGACACGCTG ACCGACACCC GCCTGCGTGC CATCCTCGCC
TTCACGCGCA CGCTCGTCGA ACGCCCCATC GAGGGCGACC GCGATGCGCT GTTGCGATTG
CCCGCGGCGG GCCTGGCCAC GGCCGACGTC GTGACGCTCG CGCAGCTCAT CGCCTTTCTG
TCGTATCAGA CGCGGCTCGT CGCCGGCTTG CGCGCCCTTC GCGAAGCCGC CGGCAGCGGC
AGCGCCACCG CCTCCACCGA GACCGCAGCA TGA
 
Protein sequence
MGTFALGVTP TDDLIDVSRS IVVTGLAPGA QVGIVAQTRR GNGVLWHSRA AFVADAQGTV 
DLTRDAPVSG DYTGVSAMGV IWSQRPEDGK AREVFPQPAT EPLTTTLTAT ANGESIHARF
VQRLAAPGVT RHDVRAPENE HGLVGTLYLP DPYAHPGPRP AVLILNGSGG GINEPRAALY
ASHGYAAFAL AYFKAPGLSD CISNTPLEYF ERALAWLRKR VEPLHDFVAV SGQSRGGELA
LLLGATFPEA VSAVIGYVPG AVVHSGQNAA APAVGREGPT WLYRGQPLPH LWEGNRTATW
APFDEGPAPH RHERAIRTAL QDADAVARAR IRIERARGPV LLLSASDDGS WPSSDYSRMV
TTKLAEVRHP YPVQHFDYEG AGHAIVFPYV PTTQLVYAHP VSGRISTGGG EPRANARADA
QSWAAVLRFL ASAVAARGAS VPDSRSLSSM DFTPAHDVVD QIAGLEDGSA THALRHAREK
VATATQGSYD ALFDADLPGL TLGERLLVAL YACRLTPAPE LAEHYRARLA NTPVDADALQ
AVDHGDIDTL TDTRLRAILA FTRTLVERPI EGDRDALLRL PAAGLATADV VTLAQLIAFL
SYQTRLVAGL RALREAAGSG SATASTETAA