Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1764 |
Symbol | |
ID | 8019419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1878988 |
End bp | 1880568 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830547 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002981718 |
Protein GI | 241663358 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.295464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCC ACGTGAAACG CCTCCTTGCC TCGTCGCTTG CTGTTGCACT GTTTGCAACT GCCGGCGCTG TCAGCGCGCA AACCCTGAAC ATCGCCTTTG CCGATCCGCT GTCGTCGCTC GACCCGCAGT TGAACAATCA CGCAGGCGAC CGCTCCGTCG ACGTGCACTT CTGGGATCTG CTGGTCGAGA ACAAGTGGAA CAAGCTGCAG CCCGGTTTGG CCCTGTCATG GAAGACGCTG GACCCGAAGA CGTGGGAATT CAAGCTGCGC CCGAACGTGA AATGGCACGA CGGCCAGCCG TTCACGGCGG ATGACGTCAT CTTCTCGTAC CAGCGCGCGC GCAGCGTGCC GGGCAGCGTT GCAACGTTCG CGGGCTATCT GCGCACGGTG GAGTCCGTCA CGGCCAAGGA CCCGCTCACG CTCATCATCA AGACGACCAT CCCGAGCCCG GACTTGCCGC TGAACCTGGC ATCCGTGCAC ATCGTCAGCA AGCACGTGGG TGAGAAGTCT TCCACCGAGG ATTACAACGC CGGCCGTGCC GTGGTGGGTA CGGGCCCCTA CAAGTTCGTC TCGTATGTGC CCGGCGATCG CGTGGTGATG GCGCGCAACG ACAACTACTG GGGCGACAAG CAGCTCTGGG AGAAGGTCAA CTACCGCTAC ATCAACAACG CTGCCGCTCG CACGGCCAAC CTGCTTTCAG GCGAAGTCGA TGTCATCGAC AAGGTGTCGG TGTCTGACCT GGCGCGCCTG CGCCAGTCGC CCAACGTGAA GGTGTTCGCC TATCCGGGCC TGCGCGTGAT GCTGCTGCAA CCAAGCTTCC GCAAGGGGCC GAACGACTAC ATCACCGGCA ACGACGGCAA GCCGCTGCCG AACAATCCGC TGCTGGATGT GCGCGTACGC CGCGCGCTGT CGCTCGCGAT CGACCGGAAA GCGATCGTCG ACCGCATCCT GCAGGGCGCC GCCACCGTCG CCAACCAATG GATGCCGTCG GACACGTACG GCTACAACCC CGATGTGAAG GACATCGCTT ACGACCCCGT GCAGGCCAAG AAGCTGCTGG CTGAAGCTGG CTTTCCGCAG GGCTTCAACC TGGTGATCCA CGTGCCGAAC GACCGCTATC CGCAAGGCCC CGAAACGGCG CAGGCGGTGG CGCAGTTCTG GACCCGCATC GGCGTAAAGT CGCGCGTGGA AGTGGTGCCC TGGTCTGTCT ACTCCGGCCG CGCCAACAAG AATGAATATG CGATGAGCAT GCTGGCCTGG GGCAACGGCA CGGGCGAGGC GAGCTATGCG CTGGTCAACG TGCTCGCCAC GGTCGACACC AAGAAGGGTC TGGGCGCGTC CAACTGGGGC CACTACAGCA ACGCGGCTGT CGACAACGCA TTGAACGCCT CCACCGAGGA ATTCAACGTC GAAAAGCGTG CGGCCATCCT GCGCCACTCG GTCAAGCTGG TCTCGGATGA CGTGGGCGTG ATGCCGCTGT ACCACTACCA GAACGTGTGG GCCGCCAAGA AGGGCCTGAA GGTGACGCCG ATGACGAGCG ATCGCACAGC AGCCCAAATG GTCACCAAGG ACGGCAAGTA A
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Protein sequence | MGTHVKRLLA SSLAVALFAT AGAVSAQTLN IAFADPLSSL DPQLNNHAGD RSVDVHFWDL LVENKWNKLQ PGLALSWKTL DPKTWEFKLR PNVKWHDGQP FTADDVIFSY QRARSVPGSV ATFAGYLRTV ESVTAKDPLT LIIKTTIPSP DLPLNLASVH IVSKHVGEKS STEDYNAGRA VVGTGPYKFV SYVPGDRVVM ARNDNYWGDK QLWEKVNYRY INNAAARTAN LLSGEVDVID KVSVSDLARL RQSPNVKVFA YPGLRVMLLQ PSFRKGPNDY ITGNDGKPLP NNPLLDVRVR RALSLAIDRK AIVDRILQGA ATVANQWMPS DTYGYNPDVK DIAYDPVQAK KLLAEAGFPQ GFNLVIHVPN DRYPQGPETA QAVAQFWTRI GVKSRVEVVP WSVYSGRANK NEYAMSMLAW GNGTGEASYA LVNVLATVDT KKGLGASNWG HYSNAAVDNA LNASTEEFNV EKRAAILRHS VKLVSDDVGV MPLYHYQNVW AAKKGLKVTP MTSDRTAAQM VTKDGK
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