Gene Rpic12D_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1759 
Symbol 
ID8019414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1873546 
End bp1875045 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID644830542 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002981713 
Protein GI241663353 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.216231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CACAAGAAGA CAATGCGCTG CAAGTGACCG GGCTCGCGGC GCTCGAAGCG 
CGTTTGCACC AGGACCTGTC GTGGTTGGAG CTGCCCGCGA AGAACTGGAC GCTGCCGCAC
ACGTTGGAGG GCCAATCCGT GCTGGATGTG GCCGTCATCG GTGGCGGCAT GGCAGGCCTG
GCGGCCTCGG CATCGCTCAA GCATCTCGGT ATCGGCGTGG TGGTGTTCGA CCGCTCGCCC
GCCGGCTTCG AAGGCCCATG GGCAACGACG GCGCGCATGG AAACGCTGCG CTCGCCAAAG
CAGTTGACCG GCCCTGCGCT CGGCCTGCCG GCGTTGACGT TTCGCGCATG GTTTGAAGCG
CAGTTCGGCA CCGATGCGTG GGAGGTGCTC GACAAGATCC CGAGACTGCA ATGGATGGAC
TACCTGCGCT GGTACCGCCG CGTGCTGCAG CTTGACGTGC GCAACGAACA CCACGTGAAG
GCCATCCACC CGCGCGTGGA TGGCGCCGTT GAATTGCTGA TCGACGCGCC GGGCCAACCG
ACGCAGCGCG TGTTTGCGCG CCGCGTGGTG CTCGCTACCG GCCGGGACGG GCTGGGCGGC
GCATCCGTGC CCGATTTTGC GCATCGGCTG CCGCGCCGCT GGTGGGCGCA TTCGTCTGAC
GAGATGGACT ACGGCACGCT GGCCGGCAAG CGCGTGGGCG TGATCGGTGC AGGCGCATCC
GCGATGGATT CGGCAGCGAC GGCGCTCGAG GCCGGCGCCG CCAGCGTGGA CATGCTGATC
CGCCGCCCCG ACCTGCCACG CGTGAACAAG GGCAAGGGCG CTGGGTGCCC AGGCCTCGTG
CATGGTCACC TGCACCTGAC CGATGCCTGG AAATGGCGCA TCCGTCATTA CATCAATGTC
GAGCAGGTCC CGCCGCCGCG CGGCAGCACG CTGCGTGTGT CGCGGCACCC GAATGCGCGC
TTCAACCTGG GTTGCGGCAT CCTGGGCGTG GACGAGCACG ACGGCGTGCT GCACGTCGCC
ACGACCAAGG GCGTATTCCA GTTGGACTTC CTGATCTTCT CGACGGGCTT TCGCACCGAT
TGGGCCTCGC GCCCCGAGTT CAGCGCTCTG GCACCGCATA TCCGCCAATG GCGCGACCGC
TACACGCCGC GCCCCGGCGA GGAAGACGCG GAACTGGCCG ATTCGCCCGA CCTCGGCCAC
GCATTCGAAT TTCGCGAGAA AACGCCCGGC ACGCTGCCCG GCCTGTCGCG CGTGCATTGC
TTCTGTTATC CCGCGTCCGT CACGCACGGC AGCGTCTCTG GCGACATCCC GGCCATCAGC
GAGGGCGCCA AGCGCTTGGC GCAAGGCATT GCCGGCTTGC TGTACCAGGA AGACATCGAC
GGACACTACG CCGCCATCCA GGCCTATGCC GAGCCGGAAA TCTTTGGCGA TGAATGGACG
CCCGCGCCGC CGCCCGGTGC GGAGGCGAAT GCCACTTCCG GGCAGGAGGC TGCACGATGA
 
Protein sequence
MTAAQEDNAL QVTGLAALEA RLHQDLSWLE LPAKNWTLPH TLEGQSVLDV AVIGGGMAGL 
AASASLKHLG IGVVVFDRSP AGFEGPWATT ARMETLRSPK QLTGPALGLP ALTFRAWFEA
QFGTDAWEVL DKIPRLQWMD YLRWYRRVLQ LDVRNEHHVK AIHPRVDGAV ELLIDAPGQP
TQRVFARRVV LATGRDGLGG ASVPDFAHRL PRRWWAHSSD EMDYGTLAGK RVGVIGAGAS
AMDSAATALE AGAASVDMLI RRPDLPRVNK GKGAGCPGLV HGHLHLTDAW KWRIRHYINV
EQVPPPRGST LRVSRHPNAR FNLGCGILGV DEHDGVLHVA TTKGVFQLDF LIFSTGFRTD
WASRPEFSAL APHIRQWRDR YTPRPGEEDA ELADSPDLGH AFEFREKTPG TLPGLSRVHC
FCYPASVTHG SVSGDIPAIS EGAKRLAQGI AGLLYQEDID GHYAAIQAYA EPEIFGDEWT
PAPPPGAEAN ATSGQEAAR