Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1759 |
Symbol | |
ID | 8019414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1873546 |
End bp | 1875045 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830542 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002981713 |
Protein GI | 241663353 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.216231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.394311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTG CACAAGAAGA CAATGCGCTG CAAGTGACCG GGCTCGCGGC GCTCGAAGCG CGTTTGCACC AGGACCTGTC GTGGTTGGAG CTGCCCGCGA AGAACTGGAC GCTGCCGCAC ACGTTGGAGG GCCAATCCGT GCTGGATGTG GCCGTCATCG GTGGCGGCAT GGCAGGCCTG GCGGCCTCGG CATCGCTCAA GCATCTCGGT ATCGGCGTGG TGGTGTTCGA CCGCTCGCCC GCCGGCTTCG AAGGCCCATG GGCAACGACG GCGCGCATGG AAACGCTGCG CTCGCCAAAG CAGTTGACCG GCCCTGCGCT CGGCCTGCCG GCGTTGACGT TTCGCGCATG GTTTGAAGCG CAGTTCGGCA CCGATGCGTG GGAGGTGCTC GACAAGATCC CGAGACTGCA ATGGATGGAC TACCTGCGCT GGTACCGCCG CGTGCTGCAG CTTGACGTGC GCAACGAACA CCACGTGAAG GCCATCCACC CGCGCGTGGA TGGCGCCGTT GAATTGCTGA TCGACGCGCC GGGCCAACCG ACGCAGCGCG TGTTTGCGCG CCGCGTGGTG CTCGCTACCG GCCGGGACGG GCTGGGCGGC GCATCCGTGC CCGATTTTGC GCATCGGCTG CCGCGCCGCT GGTGGGCGCA TTCGTCTGAC GAGATGGACT ACGGCACGCT GGCCGGCAAG CGCGTGGGCG TGATCGGTGC AGGCGCATCC GCGATGGATT CGGCAGCGAC GGCGCTCGAG GCCGGCGCCG CCAGCGTGGA CATGCTGATC CGCCGCCCCG ACCTGCCACG CGTGAACAAG GGCAAGGGCG CTGGGTGCCC AGGCCTCGTG CATGGTCACC TGCACCTGAC CGATGCCTGG AAATGGCGCA TCCGTCATTA CATCAATGTC GAGCAGGTCC CGCCGCCGCG CGGCAGCACG CTGCGTGTGT CGCGGCACCC GAATGCGCGC TTCAACCTGG GTTGCGGCAT CCTGGGCGTG GACGAGCACG ACGGCGTGCT GCACGTCGCC ACGACCAAGG GCGTATTCCA GTTGGACTTC CTGATCTTCT CGACGGGCTT TCGCACCGAT TGGGCCTCGC GCCCCGAGTT CAGCGCTCTG GCACCGCATA TCCGCCAATG GCGCGACCGC TACACGCCGC GCCCCGGCGA GGAAGACGCG GAACTGGCCG ATTCGCCCGA CCTCGGCCAC GCATTCGAAT TTCGCGAGAA AACGCCCGGC ACGCTGCCCG GCCTGTCGCG CGTGCATTGC TTCTGTTATC CCGCGTCCGT CACGCACGGC AGCGTCTCTG GCGACATCCC GGCCATCAGC GAGGGCGCCA AGCGCTTGGC GCAAGGCATT GCCGGCTTGC TGTACCAGGA AGACATCGAC GGACACTACG CCGCCATCCA GGCCTATGCC GAGCCGGAAA TCTTTGGCGA TGAATGGACG CCCGCGCCGC CGCCCGGTGC GGAGGCGAAT GCCACTTCCG GGCAGGAGGC TGCACGATGA
|
Protein sequence | MTAAQEDNAL QVTGLAALEA RLHQDLSWLE LPAKNWTLPH TLEGQSVLDV AVIGGGMAGL AASASLKHLG IGVVVFDRSP AGFEGPWATT ARMETLRSPK QLTGPALGLP ALTFRAWFEA QFGTDAWEVL DKIPRLQWMD YLRWYRRVLQ LDVRNEHHVK AIHPRVDGAV ELLIDAPGQP TQRVFARRVV LATGRDGLGG ASVPDFAHRL PRRWWAHSSD EMDYGTLAGK RVGVIGAGAS AMDSAATALE AGAASVDMLI RRPDLPRVNK GKGAGCPGLV HGHLHLTDAW KWRIRHYINV EQVPPPRGST LRVSRHPNAR FNLGCGILGV DEHDGVLHVA TTKGVFQLDF LIFSTGFRTD WASRPEFSAL APHIRQWRDR YTPRPGEEDA ELADSPDLGH AFEFREKTPG TLPGLSRVHC FCYPASVTHG SVSGDIPAIS EGAKRLAQGI AGLLYQEDID GHYAAIQAYA EPEIFGDEWT PAPPPGAEAN ATSGQEAAR
|
| |