Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1707 |
Symbol | |
ID | 8019360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1814750 |
End bp | 1815571 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830489 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002981662 |
Protein GI | 241663302 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.230326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCCTG TGGAAGCGGG TTGGATCGTC AGCACCGGGC TGGGCTCTGT GGTCGGGCTC ATTCTGGCGT TGACAGGCGC AGGGGGGGCC ATTGTCGCAG TGCCGCTGCT GATTTTTGGG TTGCATCTGT CGGTGCCTGA AGCTGCGCCG ATTGCGTTGC TGGCGGTGGG ACTGTCTGCG GGGCTCGGTG CGATGCTCGG ATTGCGCGAG GGCAAGGTCC GCTACAAGGC CGCGGGGCTG ATAGCGCTGT GCGGCGTGGT GATCTCGCCG TTTGGCATCT GGGTTGCGCA CCGCGTACCG AACACGCCGC TCACGCTGCT GTTTGCGGTG GTGCTCGCCT ACGTGGCGGT GCGCATGTTC CGGCAAGCGC GCGCAGCACC GTCCACCGAG CCGCGCCCGA GGCGCACGGC ACCGCCGTGC CACCTTGACA GCACCACGGC CAAGCTCGTC TGGACGCTGC CGTGCGCGCG CGCATTGGCT GCGTCGGGCG TGGGCGCAGG CTTCCTGTCC GGGTTGCTGG GCGTGGGCGG CGGCTTTGTC ATCGTGCCCG CATTGCGCCG CGCGACCGAT CTGCCGATGC AAACCATTGT CGCCACCTCG TTGGCAGTGA TTGCGCTGGT GTCCGCTGGC GGTGTGGCCG CCTCGGCCAT CGGCGGGCAT GTCGATTGGC ATATCGCACT GCCGTTTGCC GCCGGCGCCT TGACCGGCAT GCTGGTGGGA CGGCGCTTTG CGCAGCATTT GGCAGGGCCG GCGCTGCAGC AGGGATTTGC CGCGTTCGCG GGCTTCGTGG CGCTCGGGAT GATTGTCCGA ACACTCATTT GA
|
Protein sequence | MSPVEAGWIV STGLGSVVGL ILALTGAGGA IVAVPLLIFG LHLSVPEAAP IALLAVGLSA GLGAMLGLRE GKVRYKAAGL IALCGVVISP FGIWVAHRVP NTPLTLLFAV VLAYVAVRMF RQARAAPSTE PRPRRTAPPC HLDSTTAKLV WTLPCARALA ASGVGAGFLS GLLGVGGGFV IVPALRRATD LPMQTIVATS LAVIALVSAG GVAASAIGGH VDWHIALPFA AGALTGMLVG RRFAQHLAGP ALQQGFAAFA GFVALGMIVR TLI
|
| |