Gene Rpic12D_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1707 
Symbol 
ID8019360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1814750 
End bp1815571 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID644830489 
Productprotein of unknown function DUF81 
Protein accessionYP_002981662 
Protein GI241663302 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.230326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTG TGGAAGCGGG TTGGATCGTC AGCACCGGGC TGGGCTCTGT GGTCGGGCTC 
ATTCTGGCGT TGACAGGCGC AGGGGGGGCC ATTGTCGCAG TGCCGCTGCT GATTTTTGGG
TTGCATCTGT CGGTGCCTGA AGCTGCGCCG ATTGCGTTGC TGGCGGTGGG ACTGTCTGCG
GGGCTCGGTG CGATGCTCGG ATTGCGCGAG GGCAAGGTCC GCTACAAGGC CGCGGGGCTG
ATAGCGCTGT GCGGCGTGGT GATCTCGCCG TTTGGCATCT GGGTTGCGCA CCGCGTACCG
AACACGCCGC TCACGCTGCT GTTTGCGGTG GTGCTCGCCT ACGTGGCGGT GCGCATGTTC
CGGCAAGCGC GCGCAGCACC GTCCACCGAG CCGCGCCCGA GGCGCACGGC ACCGCCGTGC
CACCTTGACA GCACCACGGC CAAGCTCGTC TGGACGCTGC CGTGCGCGCG CGCATTGGCT
GCGTCGGGCG TGGGCGCAGG CTTCCTGTCC GGGTTGCTGG GCGTGGGCGG CGGCTTTGTC
ATCGTGCCCG CATTGCGCCG CGCGACCGAT CTGCCGATGC AAACCATTGT CGCCACCTCG
TTGGCAGTGA TTGCGCTGGT GTCCGCTGGC GGTGTGGCCG CCTCGGCCAT CGGCGGGCAT
GTCGATTGGC ATATCGCACT GCCGTTTGCC GCCGGCGCCT TGACCGGCAT GCTGGTGGGA
CGGCGCTTTG CGCAGCATTT GGCAGGGCCG GCGCTGCAGC AGGGATTTGC CGCGTTCGCG
GGCTTCGTGG CGCTCGGGAT GATTGTCCGA ACACTCATTT GA
 
Protein sequence
MSPVEAGWIV STGLGSVVGL ILALTGAGGA IVAVPLLIFG LHLSVPEAAP IALLAVGLSA 
GLGAMLGLRE GKVRYKAAGL IALCGVVISP FGIWVAHRVP NTPLTLLFAV VLAYVAVRMF
RQARAAPSTE PRPRRTAPPC HLDSTTAKLV WTLPCARALA ASGVGAGFLS GLLGVGGGFV
IVPALRRATD LPMQTIVATS LAVIALVSAG GVAASAIGGH VDWHIALPFA AGALTGMLVG
RRFAQHLAGP ALQQGFAAFA GFVALGMIVR TLI