| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1692 |
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| Symbol | |
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| ID | 8019345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1802666 |
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| End bp | 1803748 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644830474 |
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| Product | type VI secretion-associated protein, ImpA family |
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| Protein accession | YP_002981647 |
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| Protein GI | 241663287 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.376241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.67881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTCA ATAAGCTTAT GAAGGCCGTC GCTCCACAAT ATGCCTCCTC GCCCGACATC
CGTTTTGCGG ATCTGGCGTT ACCGGTCAGT GCGGATCAGC CATGTGGTCC TGATCTTGAA
TACGACACGG ACTTTGTGGT GCTGCAAGCC CGTGCGACCC AGTGTGAGGC GGCCCAGTAT
GGCGACTTTG TTGCGCCGAC CGAGGTGCTG AATTGGCCTG AACTGGAGCG CGATTGTCAG
CGGCTGTTGT TGCGCACCAA GGACATCCGG CTACTGACGC TTTTTCTGCG ATGCCGCACT
CGGCTGGACC AAGCCGAGGG CCTGCGCGAT GGCCTCGCGC TAATGCATAC GGTGCTGACG
GCCTTCCCCG AGCAAGTCCA TCCTCGGCTT GAGATCGACG GGGACGTTGA CCCTGGCGTT
CGGGCCAATG CGCTCGCAAC GCTGGTCGAT CCGCAAGGGC TGTTAGCCGA CGTGCGTGAA
ATTGCCCTGG GCAACAATGC CATGCGTCTT CAGATACGCG ATATCGAGCG TGCGCTGGGC
AAGTCACGCC CAGCCGATGC GCTTGCACCG GCATCAGTGC ATCGGCAACT AGAAGCCCTA
CATAGCCAAG GAGCCCCTGA GATTGAGGCC ATGCAGGAAG CCTGCGCGCT GGCGCAGTCC
ATTCAGCTGT GGTCCGAAAC TTCACTGCCC AATCACGCGC CAGATCTAAA GCCGTTGATA
CGGCTGCTGC AATTGGCCGG GCGTCCTGAG CCGGCACAGC CTGTGACCAT TGAGTACGCG
CCGGCAAGTG AAATACCCCC TGCTGCTGCG CAGGTCCCTG CCCCCTCACG CGCCAACAAT
GCCCCGTTGC CGCCAGCAGA CGCGCAACAT GCCCCCTCCC AGAATGCCAA CACTATGCCA
ACCAGCCGTC ACGACGCTCT GACGCAAATC TGCTTCGCAC GCACTTGGTT TGAAGCGCAC
GAGCCAAGCA GTCCGGTCGC GCTGTTGCTT CGGCAGGCAG AGTCGCTGGT GGGAAAACCG
TTTGCGGAGG TATTTCAGGC GATTCCCGCG GATATCGTTG AAAGGTGGGC GCAGAACGAA
TAG
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| Protein sequence | MLLNKLMKAV APQYASSPDI RFADLALPVS ADQPCGPDLE YDTDFVVLQA RATQCEAAQY
GDFVAPTEVL NWPELERDCQ RLLLRTKDIR LLTLFLRCRT RLDQAEGLRD GLALMHTVLT
AFPEQVHPRL EIDGDVDPGV RANALATLVD PQGLLADVRE IALGNNAMRL QIRDIERALG
KSRPADALAP ASVHRQLEAL HSQGAPEIEA MQEACALAQS IQLWSETSLP NHAPDLKPLI
RLLQLAGRPE PAQPVTIEYA PASEIPPAAA QVPAPSRANN APLPPADAQH APSQNANTMP
TSRHDALTQI CFARTWFEAH EPSSPVALLL RQAESLVGKP FAEVFQAIPA DIVERWAQNE
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