| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1613 |
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| Symbol | |
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| ID | 8019263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1711722 |
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| End bp | 1712729 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830393 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002981569 |
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| Protein GI | 241663209 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000964161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGG GTGCCATTTT CGTTGCGTTG CGATTTGTTA TTCACATGCG GGCGTTTTAC
ACCGACCATT TTGTCTTGCC ATTGCCGCCA GGGCATCGTT TCCCGATGCG CAAGTACAGC
GACCTGCGGG CGCGGGTCCT GGAAGACGTC CCGGGGCTGT CAATGCACGA GGCGCCGCGG
GCAGATGATG ACGCGTTGCT GCTGGCGCAC ACGACTGAAT ATGTTTGTGC GGTAAGCGCC
GGTCGGCTTG ATCCGGCGCG CCAGCGCGAA ATCGGCTTTC CTTGGTCACC GGAAATGGTG
GAGCGCAGCC GTCGTTCGGC CGGCGCCACG ATGGCCGCAT GTGACGCAGC GCTGGCCGAT
GGCATTGCCG TCAATCTTGC GGGCGGCACG CACCATGCCT ATGCAGATAA GGGCGGCGGT
TTTTGTGTAT TCAACGACGC AGCCATCGCT TCCCGCTGGA TCCAGCGCCA ATCCGGCAGG
ACGCCGGGGG ATTTTCCGGT CGCAATCGTC GATCTAGACG TACATCAGGG CAATGGCACG
GCGTCCATCC TGCGCGATGA CGCCACGGTT TTCACCTTGT CGCTGCACGG CGAAAAAAAC
TATCCGTTCC GCAAGGAGGC GTCAGACCTG GATGTCGGTC TGCACGATGG CTGCGGCGAC
GAAGACTATT TGCAAGCGCT GACCGGCGCA CTCGACATCC TGGCCGGGCG CTTCAAGCCG
CAGTTGATCA TCTATCTGGC CGGCGCGGAT CCGCACGAGG GCGATCGGCT CGGCCGGCTC
AAACTGACGC TGCAGGGCTT GGCCCGGCGC GATCAGGAAG TCTTCGATTT CGCGTATCAA
CGGCGCATAC CGGTTGCCGT TACCATGGCG GGCGGCTACG GCAACAATAT CGACGATACC
GTGGCCGTCC ACGCGCAGAC CATCGCCCTG GCTGCCCGCC ACGCACAGCG CTGGGCGGCA
CGCGACGAGG GCGCTGGCGC ATCGACCTCT CTTCCGCTTT CCGCATGA
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| Protein sequence | MRPGAIFVAL RFVIHMRAFY TDHFVLPLPP GHRFPMRKYS DLRARVLEDV PGLSMHEAPR
ADDDALLLAH TTEYVCAVSA GRLDPARQRE IGFPWSPEMV ERSRRSAGAT MAACDAALAD
GIAVNLAGGT HHAYADKGGG FCVFNDAAIA SRWIQRQSGR TPGDFPVAIV DLDVHQGNGT
ASILRDDATV FTLSLHGEKN YPFRKEASDL DVGLHDGCGD EDYLQALTGA LDILAGRFKP
QLIIYLAGAD PHEGDRLGRL KLTLQGLARR DQEVFDFAYQ RRIPVAVTMA GGYGNNIDDT
VAVHAQTIAL AARHAQRWAA RDEGAGASTS LPLSA
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