Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1554 |
Symbol | |
ID | 8019201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1648961 |
End bp | 1649890 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644830332 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981511 |
Protein GI | 241663151 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.15921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG ATCCGCAATC ACTTCGCCTG TTTATCAGCG TGCTTGAGGA AGGCACCATT GCGGCTGCCT CGCAGCGCGA ACACATTGCC GCGGCCGCCG TGAGTCGCCG GCTCAGCGAG CTGGAGTCGC TTCTGGGATC GCAACTCCTG ATTCGCAGCA ATAAGGGCAT CGAACCTACG GAAGCCGGAA CGGCGCTGAT GTACATGGCG CGCGGTGTCC TGAACGACCT CAGCGGCATC GTCTCGGAGA TGCGGGAGTA CTCGCATGGC AAGCGGGGAT CGGTTCGCCT GCTCGCCAAT ATTTCCGCGA TTACCCAGTT TTTGCCCGCA CTCCTGAAAT CGTTCATGGA AAAGCACCCG AATATCCGGG TGACCCTTGA ACAGATGGAG AGCCTCGCGA TCACGCGGAG CGTCGCCGAA AGCCGTGCCG ATATTGGGCT CTTTACGCGC ATGCCGCATG AGGCCAGCGT CGAGATCCAC CCCTTTCGCA CCGACGAACT CGTGGTCTTG CTTCAAGCGG ATCACCCGCT TGCGGACCGC GCCAGCGTTT GCTTCGATGA AGTACTTGAT TTCGACGTTG TGTCCCTGCA CAGCGGGACA CACCTGCACT ACCAGATGCT GCAGGCCGCA AACGAATCCG GCCGCACATT CTCGCCGCGG ATGGAGGTAT CCAGTTACGA TGCGCTCTGT TTAATGGTGC AGACCGGCAT GGGCATCGGC ATATTGCCAA AGGGCAGTAC CAGCGCGTAT AGCATGCCGG AAATGAAGAT CCTGCGTCTG GACGAACCGT GGGCCCAGCG AGAACTATCG ATGTGCGTGC GCAACGTGGA AACACTGACA CCGGCGGCAC GACTCCTGTT CGATCACCTT CAGCGCGAGC AATCTGCTGA AACACCTGCA GTGAATGGCA CCGCGGCGAC GTCCTCCTAG
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Protein sequence | MKLDPQSLRL FISVLEEGTI AAASQREHIA AAAVSRRLSE LESLLGSQLL IRSNKGIEPT EAGTALMYMA RGVLNDLSGI VSEMREYSHG KRGSVRLLAN ISAITQFLPA LLKSFMEKHP NIRVTLEQME SLAITRSVAE SRADIGLFTR MPHEASVEIH PFRTDELVVL LQADHPLADR ASVCFDEVLD FDVVSLHSGT HLHYQMLQAA NESGRTFSPR MEVSSYDALC LMVQTGMGIG ILPKGSTSAY SMPEMKILRL DEPWAQRELS MCVRNVETLT PAARLLFDHL QREQSAETPA VNGTAATSS
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