| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1553 |
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| Symbol | |
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| ID | 8019200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1647428 |
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| End bp | 1648747 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644830331 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002981510 |
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| Protein GI | 241663150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.161151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.262246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTATCA ACTCATCGCC AGACGCGGCA AGCACCGGGG CGTTCCGGCA GCCTGCTCTT
TCGTCTACCG TACAGCGCTA TGTGACGCTC GGTGGTTCCT GGGCGGCATG GCTGTTCGAT
GCGCTGGACG CGACCATCTT CGGTTTCGTG ATGCTTGCGA TTGCGAATAC CTTCTCCGTT
GGCCTGAGGG ATGTCGTCTC CACTGTCGCA TGGTTTCTGC TCGCAACAGG GATCGGTGGG
CTGTTTCTGG GCAATATCGC GGACCGGATC GGACGCAAGA AGACCATTCT CGCGTCCGTG
TTCATCTATG GCACCGGAAC GCTGCTGTGT GGCTTCGCAT CGAGCGTGCT CGAGTTGAAT
GTCTACCGAT TCTGCGTCGG TGTGGCCGTG GGTGGCCTGT GGTCCGCTGC ATCGGCACTG
GTGTCTGAGA TCTGGGCCCC GGAGGGCCGC GCCAAGGCCA TCGCGTTCAT GCAAACCGGT
TGGTCAGGCG GCGGACTCCT GGCGGCATGC TTCGCATGGA CGCTACTCGA CCCCTCGAAC
CCCGATTCCT GGCGCAAGCT CTTCATCTAC GCATCGATTC CTGCATACGT CACGTTTGTA
TTCATCCTGC TGTTCGTGAA GGAGTCGCCG GTCTGGCTTG CTAACCGAAC CTACAAGGCG
AAACACGCGA AGAAGTCGAG CCTGTTCGAG ATCTTCCGCC CGGCCTACCT GAAGATGACC
CTGCTGGGCC TGTCGATTTC GATCTTCGGC ATGTACGGGT ACTGGATCAT CACGACCTTT
ACCCCGACCT ATCTGCAGAG CATCCTGCAT GTGCGTGTGG ACCAGGCTCC GGTGTTCCTG
ATTTGGACCG GCATCGGTGC CACGATAGGC TATCTCGTCT ACGGCCAGCT TGCCGAATTG
ATTGGTCGCC GCAAGTCGTT TGCGCTGTTC TTCCTGGGCA TGGCGATCAT GGTGCCGGTG
TTCGCATACG GCGCGACATT GATGCCACTG ACGGACGGAA AACTAGCATT CACAACCCGC
AACATCGTCG CCATTGGCGT CCTTGCGGCA CTGCTCGGCT TCTTTACCGG CTACTTCAGC
GGCTTCGGCG CCTGGTATTC CGAACTATTC CCCACCAGCA TTCGTTCCAC GGCGGCCGGC
TTCTGTTTCA ACTTTGGCCG CGTGGGCGCC ATCCTCGGTA TCAAGCTGGT GCCGATCCTG
ATACCGCTGA TCGGATTCAC TGCGACGATT TCGCTGGCAT CGGTGTCCTA CCTCATTGCG
TCGGCCATGG TGTTCCTGCT TCAGGAAACC AAGGGCGTGC GTCTCACCAG CGACAACTAA
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| Protein sequence | MTINSSPDAA STGAFRQPAL SSTVQRYVTL GGSWAAWLFD ALDATIFGFV MLAIANTFSV
GLRDVVSTVA WFLLATGIGG LFLGNIADRI GRKKTILASV FIYGTGTLLC GFASSVLELN
VYRFCVGVAV GGLWSAASAL VSEIWAPEGR AKAIAFMQTG WSGGGLLAAC FAWTLLDPSN
PDSWRKLFIY ASIPAYVTFV FILLFVKESP VWLANRTYKA KHAKKSSLFE IFRPAYLKMT
LLGLSISIFG MYGYWIITTF TPTYLQSILH VRVDQAPVFL IWTGIGATIG YLVYGQLAEL
IGRRKSFALF FLGMAIMVPV FAYGATLMPL TDGKLAFTTR NIVAIGVLAA LLGFFTGYFS
GFGAWYSELF PTSIRSTAAG FCFNFGRVGA ILGIKLVPIL IPLIGFTATI SLASVSYLIA
SAMVFLLQET KGVRLTSDN
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