| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1540 |
|---|
| Symbol | |
|---|
| ID | 8019187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1633922 |
|---|
| End bp | 1635328 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830319 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002981498 |
|---|
| Protein GI | 241663138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0867894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACC AGCCTGCGCC CCATGTCGCC GCGGCCGCAA ACCTCCAGCC GCGCCGGGCC
GCGGTTGCCG CGTTCATCGG CACGACCATC GAGTGGTACG ACTTCTATAT CTACGGCCTC
GCTGCCGCAC TTGTGTTCGG CAAAGTGTTC TTCTCCAGGA CGCTGGACCC CGGCATCGCC
ACGCTGCTCT CGTTCGTCAC GCTGTGGGCC GGCTTTGCGG CGCGGCCCAT CGGCGGGATC
ATCTTCGGGC ATCTGGGCGA CAAGATCGGC CGCAAGACCA CGCTCATCAT CACGCTCATC
CTCATGGGCG TGGCGACGAT GGGCATCGGC CTGCTGCCGG GCTATGCGCA GATCGGCCTA
TGGGCGCCGG TCGGGTTGGT TGTGCTGCGC GTGATCCAGG GCGTGGCCGT GGGCGGCGAG
TGGGGCGGTG CGGTCCTGAT TGCCAGCGAA AGCGCGCCCA AGCGCAAGAG CATTCTGTAC
TCGGCGTTTG CTCAGCAGGG TTCGCCTACG GGCAACCTGC TGGCAACGCT GGTGTTCTTC
GCGCTGAGTG CGCTGCCGAC ACCGCAGTTC ATGCTGTGGG GCTGGCGCGT GCCGTTCCTG
CTGTCGGCGC TGCTGGTGAT CGTCGGCATG GTCATCCGCC TGAAGCTGGA GGAGTCGGAC
GACATGAAGC GCGTGCTGGC ACAGAAGAAG ACCGTCAAAC TGCCGCTCAA AGATGTCGTG
CGCGACCACT GGGGCCTCGT GCTGCTGGGT GCCGGTACGC TGCCGCTCAT TCATGTGACG
TACCTGAAAA GCAACTTCGC GCTGGCGTGG GCCACGAAGG AACTCGGCTA CGCCCAGGAC
ACCTTCCTCG GCATCATCGC GATTGCGCTG GTGGTGCAGT TCATCACGCA GCCACTCGGT
GCATGGCTGG TCTCGCGCAT GGATATGCGT CGTGCGATCT GCCTGATGGT GCTGCCGGAG
TTTCTGCTCA TGCCGGTGAT GTTCTTTGCC ATCGAGACGA AGGTGGTCTG GATTGCTCTG
CTCGGCATGT GTTTGGCGAC GATTCCGCAC TCGATGTTCT ATGGCGCCAT CGGCGGCATT
CTGGCGCGCG TGTTTCCGAC GCGCGTCCGC TATACGGGGT TGTCGCTGGC GTATCAGCTG
TGCTCGCTCG TGGTGGGTGG CGGCACGCCG GTATTTGCGC AGTGGATGCT CAACAGCAGC
GGCAACATCG TCGGCGTGGC GGTGTCATCG GCGCTGTATG CGCTGGTGTC GCTGGCATGC
ACGCTGGTAC TGCTCAACCG CACCGGATAT CGCGCAGACG AACTGTCCAC CGCCGAACGC
GCAGATGCAA TGGAGTTGGG GCAGGGTGAT GCCGATGTCT CCCGGCCGCT CGCCGGCCCG
GTGGGCAAGC CTGTGGCTGC TGTCTGA
|
|---|
| Protein sequence | MPHQPAPHVA AAANLQPRRA AVAAFIGTTI EWYDFYIYGL AAALVFGKVF FSRTLDPGIA
TLLSFVTLWA GFAARPIGGI IFGHLGDKIG RKTTLIITLI LMGVATMGIG LLPGYAQIGL
WAPVGLVVLR VIQGVAVGGE WGGAVLIASE SAPKRKSILY SAFAQQGSPT GNLLATLVFF
ALSALPTPQF MLWGWRVPFL LSALLVIVGM VIRLKLEESD DMKRVLAQKK TVKLPLKDVV
RDHWGLVLLG AGTLPLIHVT YLKSNFALAW ATKELGYAQD TFLGIIAIAL VVQFITQPLG
AWLVSRMDMR RAICLMVLPE FLLMPVMFFA IETKVVWIAL LGMCLATIPH SMFYGAIGGI
LARVFPTRVR YTGLSLAYQL CSLVVGGGTP VFAQWMLNSS GNIVGVAVSS ALYALVSLAC
TLVLLNRTGY RADELSTAER ADAMELGQGD ADVSRPLAGP VGKPVAAV
|
|---|
| |