Gene Rpic12D_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1515 
Symbol 
ID8019160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1599571 
End bp1600671 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID644830293 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_002981474 
Protein GI241663114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG CCCGCCGCCC TGCCATCAGC ATCGCGCCCA ATCAGCACGC GGACGACTCG 
CCAACGCTGT CAAAAGGCCA GCGAGCATTC AACGCGCTGA TCAAGCAGAT CGAGAATCGG
CGCAAGCGGC TGGCGGACTG GGAGGCGGCT ACCGTTCAGT TCCAGCGCCG ATATGCCGGC
GAGTTCTTGC CGCTGGAGCG CAGCCGCATC GCATTGCAGA TCCGCTTTGT GCGCAGCCTG
GACCAGGTCT ATGAGCACGA TGCCTTCACC AAGGCCGAGC GCCGCAAGAT ATCCGCGCTC
ATCATCGATC TTGCGCGTGA CCTGATTGAT GAAGACGCTA GCCTGAAGGC GCTCTACAAC
AAGTACAGCG GCACAGACTT CGACCGTGAA GCCGCGCTGC AAGCCGCGGA GATGAAGTCG
AGGCTGGAAG CGGCGCTCGG TGTCGACCTC GGCGACGACG CGGACGTGCA TTCGGAGGAA
GCGCTGCTGC AGCGCGCCCG CGCGCACATC GAGCAACGCG CCGAGAAAAA GGCCGCCGCC
GCAAGCAAGC GTGAAGCCCG CCGGGCCGCG CGCACGAAAT CTCCGAAGCA ACTTGCCGCA
GAAGCGCGGG AGGAAGACGA ACAGGCGCAG ATGAGCCTGT CCATCCGCGA GGTCTATCGC
AAGCTCGCCA GCACCCTGCA CCCGGACCGC GAAACCGATC CAGAGGAGCG AGAGCGCAAG
ACGCGGCTCA TGCAGCGCGT CAACGAGGCC TACGACAAGA ACAACCTGCT GCAACTACTG
GAATTGCAGC TGGAGCTTGA GCACATCGAC CAGCATTCGA TCAACCGCAT CAGCGAAGCG
CGATTGGCGC ACTACAACCA GATCCTGAAA GACCAGGTGC GGGAGCTTGA CCGGCAGATC
CATCGCGTCG AGACCACCTT CCGATACACG TACGGGTATC AGCAGTTCGA AGCGCTGCCG
CCGGACGCCG TCTTGCAAAA ACTCGACCTC GACATCGCAG CGCTGCGCCA ACAGGTGCGC
AACATCGAGC AGGACCTTGC CGCCTTCGAC GATTTCCGCG ACGTGCGGCG CATGCTGAAA
TCCCGCACGA CGCTCGACTG A
 
Protein sequence
MTKARRPAIS IAPNQHADDS PTLSKGQRAF NALIKQIENR RKRLADWEAA TVQFQRRYAG 
EFLPLERSRI ALQIRFVRSL DQVYEHDAFT KAERRKISAL IIDLARDLID EDASLKALYN
KYSGTDFDRE AALQAAEMKS RLEAALGVDL GDDADVHSEE ALLQRARAHI EQRAEKKAAA
ASKREARRAA RTKSPKQLAA EAREEDEQAQ MSLSIREVYR KLASTLHPDR ETDPEERERK
TRLMQRVNEA YDKNNLLQLL ELQLELEHID QHSINRISEA RLAHYNQILK DQVRELDRQI
HRVETTFRYT YGYQQFEALP PDAVLQKLDL DIAALRQQVR NIEQDLAAFD DFRDVRRMLK
SRTTLD