Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1477 |
Symbol | |
ID | 8019122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1557073 |
End bp | 1557999 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830255 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002981436 |
Protein GI | 241663076 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0994252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0692812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCG CTACCGCTGC CGCCATCACG GAATCGCAAT TCGCCGACCT GCCCAACGGC ACGCGGCTGC ATTACGCCAG CGCTGGCAAG CCCGGTGCAC CGTTGATGCT GTTCGTTCAC GGCTTTCCGG AGTTCTGGTA CGAGTGGGAA GCGCAGCTTG CTGCGTTTGG CGACACGCAC TTTGCCGTTG CGCCCGACAT GCGCGGCTAC AACCTCTCGA GCAAGCCGGC CGCAGTGGAT GCGTATCGCC CGAAACTCCT GGTGCAGGAC CTTGAGCAGT TCATTGCCGC TCTGGGCTAC GAGCGTGCCA TCGTGGTGGC GCACGACTGG GGCGGGGCGA TCTGCTGGAA CCTCGCGATC CAACATCCGG AGTTGGTGGA GCAGCTGGTA ATCGTCAATT CGCCGCACCC GTGGGTGTTT GCGAATGCGC TGCTGAGCGA TCCCGCGCAG CAGGCTTCAT CAGCGTATAT GAATTGGCTA CGCCAGCCGG GCTCGGAGCA GGCGCTGGCC GCCAACGAGT TCGAAAAGCT CGAGGGCTTC TTCAGCGGTA TGGGCCAGCC CGTGGCCGAA TGGTTCACGC CCGAGGTGCG GGCGCGCTAT CACGCCGCCT GGAGTCAGCC GGGCGAAGGC GGGTCACATG GCCTGACCGG CGGCGTCAAC TATTACCGCG CCTCGCCGTT GCACCCGCCC ACCGAGGGCA CGGCGCCGTT GCGCATCGAC CAGATGCCGC CCGAGGCCTT TGTCGTGAAG GTGCCCACGC TGGTGATCTG GGGCGAGATG GACATGGCGC TGCCGAAAAA CCTGCTGAAC GGGCTGGAGC GATTCATTCC GGACATGCGC CTGGAGCGCA TTCCCGACGG CACGCACTGG GTTGTTCACG AACAACCGGA CCGCGTTACT GCGCTGATTC GGTCGTTCGT TTCCTGA
|
Protein sequence | MNTATAAAIT ESQFADLPNG TRLHYASAGK PGAPLMLFVH GFPEFWYEWE AQLAAFGDTH FAVAPDMRGY NLSSKPAAVD AYRPKLLVQD LEQFIAALGY ERAIVVAHDW GGAICWNLAI QHPELVEQLV IVNSPHPWVF ANALLSDPAQ QASSAYMNWL RQPGSEQALA ANEFEKLEGF FSGMGQPVAE WFTPEVRARY HAAWSQPGEG GSHGLTGGVN YYRASPLHPP TEGTAPLRID QMPPEAFVVK VPTLVIWGEM DMALPKNLLN GLERFIPDMR LERIPDGTHW VVHEQPDRVT ALIRSFVS
|
| |