Gene Rpic12D_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1477 
Symbol 
ID8019122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1557073 
End bp1557999 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID644830255 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002981436 
Protein GI241663076 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0994252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0692812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CTACCGCTGC CGCCATCACG GAATCGCAAT TCGCCGACCT GCCCAACGGC 
ACGCGGCTGC ATTACGCCAG CGCTGGCAAG CCCGGTGCAC CGTTGATGCT GTTCGTTCAC
GGCTTTCCGG AGTTCTGGTA CGAGTGGGAA GCGCAGCTTG CTGCGTTTGG CGACACGCAC
TTTGCCGTTG CGCCCGACAT GCGCGGCTAC AACCTCTCGA GCAAGCCGGC CGCAGTGGAT
GCGTATCGCC CGAAACTCCT GGTGCAGGAC CTTGAGCAGT TCATTGCCGC TCTGGGCTAC
GAGCGTGCCA TCGTGGTGGC GCACGACTGG GGCGGGGCGA TCTGCTGGAA CCTCGCGATC
CAACATCCGG AGTTGGTGGA GCAGCTGGTA ATCGTCAATT CGCCGCACCC GTGGGTGTTT
GCGAATGCGC TGCTGAGCGA TCCCGCGCAG CAGGCTTCAT CAGCGTATAT GAATTGGCTA
CGCCAGCCGG GCTCGGAGCA GGCGCTGGCC GCCAACGAGT TCGAAAAGCT CGAGGGCTTC
TTCAGCGGTA TGGGCCAGCC CGTGGCCGAA TGGTTCACGC CCGAGGTGCG GGCGCGCTAT
CACGCCGCCT GGAGTCAGCC GGGCGAAGGC GGGTCACATG GCCTGACCGG CGGCGTCAAC
TATTACCGCG CCTCGCCGTT GCACCCGCCC ACCGAGGGCA CGGCGCCGTT GCGCATCGAC
CAGATGCCGC CCGAGGCCTT TGTCGTGAAG GTGCCCACGC TGGTGATCTG GGGCGAGATG
GACATGGCGC TGCCGAAAAA CCTGCTGAAC GGGCTGGAGC GATTCATTCC GGACATGCGC
CTGGAGCGCA TTCCCGACGG CACGCACTGG GTTGTTCACG AACAACCGGA CCGCGTTACT
GCGCTGATTC GGTCGTTCGT TTCCTGA
 
Protein sequence
MNTATAAAIT ESQFADLPNG TRLHYASAGK PGAPLMLFVH GFPEFWYEWE AQLAAFGDTH 
FAVAPDMRGY NLSSKPAAVD AYRPKLLVQD LEQFIAALGY ERAIVVAHDW GGAICWNLAI
QHPELVEQLV IVNSPHPWVF ANALLSDPAQ QASSAYMNWL RQPGSEQALA ANEFEKLEGF
FSGMGQPVAE WFTPEVRARY HAAWSQPGEG GSHGLTGGVN YYRASPLHPP TEGTAPLRID
QMPPEAFVVK VPTLVIWGEM DMALPKNLLN GLERFIPDMR LERIPDGTHW VVHEQPDRVT
ALIRSFVS