Gene Rpic12D_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1461 
Symbol 
ID8019106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1543344 
End bp1544648 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content68% 
IMG OID644830239 
Productprotein of unknown function DUF323 
Protein accessionYP_002981420 
Protein GI241663060 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.851366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0136368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAT CGCCCGTTCT TGATGTGCCG ACCACCGCCC TGCCCGCGCT GATGCAGCAC 
TACGGCGTGG TGCGAGCGCA ATCGCTGGCC CTGGCTGCGC CGCTGTCCGA CGCCGACGCC
ACCGTCCAGT CCATGGACGA TGCCAGCCCA GCCAAATGGC ATCTCGCCCA TACGACGTGG
TTCTTCGAGG AATTCATCCT GGGCCCCAAC GTGCCGGGCT ATCGCTCGCC GGATGCGCGC
TACCGCTACC TGTTCAATTC GTACTACGAA ACGGTGGGCG CACGGCACCC CCGCCCGCGC
CGCGGCATGC TCACGCGCCC CACCCTCGAC GAGGTGCGCG CCTATCGCGC CCATGTCGAT
GCGGCCATGC AGCGCCTGCT GGCCGGCGGC GTATCGGACG ATCTTGCCCG TCTGGTGACC
CTCGGCCTGC ACCACGAGCA GCAGCACCAG GAGTTGCTGC TGACCGATCT TCTCCACCTG
TTTGCGCAGA ACCCGCTGTG CCCGGCCTAT GCCGAAGCGC CCGCAGCACG CGTGCATGCG
GCCCCGGCGC AACCGGGTTG GGTCAGCTTC CAGGGCGGCG CCGTGCAGAT CGGCAAAACC
GATACGGGAG CCGACACCGA CTTCATGTTC GACTGCGAAG GCCCGCGCCA CACCGTCTGG
CTGGAGCCCT ATGCGTTGGC CACGCACCCT GTCACCAACC GTGAATGGCT CGCCTTCATG
CAGGACGGCG GCTATCGGCA GCCTACGCTG TGGCTGTCCG ACGGCTGGGC ATGGGTTCAG
CGGGAGGGCA TTGACGCCCC GCTCTACTGG CGGGCGGGCA TGGACGAGGC CGAAGGTTGG
CAGCAGATGT CGCTGCACGG CCTGCAGCCG GTCGATCTGG ATGCGCCGGT CACCCACATC
AGCTTTTACG AGGCCGATGC CTACGCCCGC TGGGCCGGCG CTCGCCTGCC GACGGAAGCC
GAATGGGAGC ACGCCGCAGA AGGCCAGCCC GTGCAAGGCA ACTTCGCCGG ACGGGGCGCG
CTACGTCCGT TGCCCGACCA TGGCATCGCC GAGGCCGGCG GCCTGCGCCA ACTGTTCGGT
GATGTGTGGG AATGGACCGC CAGCCCTTAT GGCCCGTACC CGGGCTTTGA GCCGGCTGAA
GGGGCCGTGG GCGAATACAA CGGCAAGTTC ATGTGCAGCC AGATGGTGCT GCGCGGCGGA
TCGTGCGTGT CGCCGGATGG ACATTTGCGG GCGACGTATC GCAACTTCTT CTATCCGCAC
CAACGGTGGC AGTTCACCGG AGTGCGGCTG GCGCGGCGGG CGTGA
 
Protein sequence
MRVSPVLDVP TTALPALMQH YGVVRAQSLA LAAPLSDADA TVQSMDDASP AKWHLAHTTW 
FFEEFILGPN VPGYRSPDAR YRYLFNSYYE TVGARHPRPR RGMLTRPTLD EVRAYRAHVD
AAMQRLLAGG VSDDLARLVT LGLHHEQQHQ ELLLTDLLHL FAQNPLCPAY AEAPAARVHA
APAQPGWVSF QGGAVQIGKT DTGADTDFMF DCEGPRHTVW LEPYALATHP VTNREWLAFM
QDGGYRQPTL WLSDGWAWVQ REGIDAPLYW RAGMDEAEGW QQMSLHGLQP VDLDAPVTHI
SFYEADAYAR WAGARLPTEA EWEHAAEGQP VQGNFAGRGA LRPLPDHGIA EAGGLRQLFG
DVWEWTASPY GPYPGFEPAE GAVGEYNGKF MCSQMVLRGG SCVSPDGHLR ATYRNFFYPH
QRWQFTGVRL ARRA