Gene Rpic12D_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1442 
Symbol 
ID8019087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1521550 
End bp1522545 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID644830220 
Productpyruvate carboxyltransferase 
Protein accessionYP_002981401 
Protein GI241663041 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.306479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.841752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA CGGGGAACGC AGTGGTACTC AACGGTCAAG GGAAAAGGGT GTTCATCCAG 
GAAGTCGCCA CGCGCGACGG CTTTCAGATT GAACCGCGCA TGGTTCCGAC CCAAGACAAG
ATCGCGCTTG TCGACCGGCT GAGCCAATGC GGGCTGAGCA AGATCGAAGT CACCTCGTTC
ACCTCGCCCA AGGCCATCCC GACCCTGGCC GACGCGGAAG ACGTGATGCG CGGTATCGCG
CGCGTGCCCG GCGTCACTTA CGCCGCGCTC GTGCCGAATA TGCGAGGCGC CGAACGTGCG
GTGGACTGCG ATGTCGACGA GTTGAACCTC GTGATGTCGG TAAGCGAAAC GCACAACCTC
GCCAACCTGC GCATGACGCC GGGGCAGTCG TTCCAGCAGG CTGCGCAGGT CGCGGCGGCA
TTCCGTTCGA GCCGCACGTC GCTCAACCTT TCGCTCTCAT GCGCGTTCGG CTGTCCGATG
GAAGGCCAGA TCCCCACTGA CACCGTGCTG ACCTGGGCGG CACGGGCCGT CGAAGCGGGC
ATCGGCGGCA TCACGCTGTG CGACACCACC GGCATGGCCT GGCCCAGCCA GGTGTTCGCG
CTGTGCAGTG CATTCCGGCT GGCGTTCCCC CAAACCACGC TGACCGTGCA CTTGCACAAC
ACGCGCGGCA TGGCACTTGC CAACGTGCTG GCCGCGCTGC AGGCGGGAGT CGATCGCTTC
GATGGCGCGC TCGGCGGCCT GGGAGGCTGC CCCTACGCGC CCGGTGCCTC GGGCAACGTC
TGCACCGAGG ACATGGTGCA CATGCTTGAA CTCCTGAACT ACGATACTGG CACCGACCTT
GGCGCCCTGC TGGACGCTTC GCGACTGTTG CCGGGCCTCA TCGGTCATGA CACCAACGGT
CAGGTCGCCA AGGCCGGACG CACCCACGAT CTGCACCCCA CGCCCGACTA TGTTGAGACG
GCCCGGCAGC ACGCCCTGTC GAAAGCACCG GCTTGA
 
Protein sequence
MSSTGNAVVL NGQGKRVFIQ EVATRDGFQI EPRMVPTQDK IALVDRLSQC GLSKIEVTSF 
TSPKAIPTLA DAEDVMRGIA RVPGVTYAAL VPNMRGAERA VDCDVDELNL VMSVSETHNL
ANLRMTPGQS FQQAAQVAAA FRSSRTSLNL SLSCAFGCPM EGQIPTDTVL TWAARAVEAG
IGGITLCDTT GMAWPSQVFA LCSAFRLAFP QTTLTVHLHN TRGMALANVL AALQAGVDRF
DGALGGLGGC PYAPGASGNV CTEDMVHMLE LLNYDTGTDL GALLDASRLL PGLIGHDTNG
QVAKAGRTHD LHPTPDYVET ARQHALSKAP A