Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1442 |
Symbol | |
ID | 8019087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1521550 |
End bp | 1522545 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830220 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_002981401 |
Protein GI | 241663041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.306479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.841752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA CGGGGAACGC AGTGGTACTC AACGGTCAAG GGAAAAGGGT GTTCATCCAG GAAGTCGCCA CGCGCGACGG CTTTCAGATT GAACCGCGCA TGGTTCCGAC CCAAGACAAG ATCGCGCTTG TCGACCGGCT GAGCCAATGC GGGCTGAGCA AGATCGAAGT CACCTCGTTC ACCTCGCCCA AGGCCATCCC GACCCTGGCC GACGCGGAAG ACGTGATGCG CGGTATCGCG CGCGTGCCCG GCGTCACTTA CGCCGCGCTC GTGCCGAATA TGCGAGGCGC CGAACGTGCG GTGGACTGCG ATGTCGACGA GTTGAACCTC GTGATGTCGG TAAGCGAAAC GCACAACCTC GCCAACCTGC GCATGACGCC GGGGCAGTCG TTCCAGCAGG CTGCGCAGGT CGCGGCGGCA TTCCGTTCGA GCCGCACGTC GCTCAACCTT TCGCTCTCAT GCGCGTTCGG CTGTCCGATG GAAGGCCAGA TCCCCACTGA CACCGTGCTG ACCTGGGCGG CACGGGCCGT CGAAGCGGGC ATCGGCGGCA TCACGCTGTG CGACACCACC GGCATGGCCT GGCCCAGCCA GGTGTTCGCG CTGTGCAGTG CATTCCGGCT GGCGTTCCCC CAAACCACGC TGACCGTGCA CTTGCACAAC ACGCGCGGCA TGGCACTTGC CAACGTGCTG GCCGCGCTGC AGGCGGGAGT CGATCGCTTC GATGGCGCGC TCGGCGGCCT GGGAGGCTGC CCCTACGCGC CCGGTGCCTC GGGCAACGTC TGCACCGAGG ACATGGTGCA CATGCTTGAA CTCCTGAACT ACGATACTGG CACCGACCTT GGCGCCCTGC TGGACGCTTC GCGACTGTTG CCGGGCCTCA TCGGTCATGA CACCAACGGT CAGGTCGCCA AGGCCGGACG CACCCACGAT CTGCACCCCA CGCCCGACTA TGTTGAGACG GCCCGGCAGC ACGCCCTGTC GAAAGCACCG GCTTGA
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Protein sequence | MSSTGNAVVL NGQGKRVFIQ EVATRDGFQI EPRMVPTQDK IALVDRLSQC GLSKIEVTSF TSPKAIPTLA DAEDVMRGIA RVPGVTYAAL VPNMRGAERA VDCDVDELNL VMSVSETHNL ANLRMTPGQS FQQAAQVAAA FRSSRTSLNL SLSCAFGCPM EGQIPTDTVL TWAARAVEAG IGGITLCDTT GMAWPSQVFA LCSAFRLAFP QTTLTVHLHN TRGMALANVL AALQAGVDRF DGALGGLGGC PYAPGASGNV CTEDMVHMLE LLNYDTGTDL GALLDASRLL PGLIGHDTNG QVAKAGRTHD LHPTPDYVET ARQHALSKAP A
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