Gene Rpic12D_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1375 
Symbol 
ID8019020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1455878 
End bp1456522 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID644830155 
Producthypothetical protein 
Protein accessionYP_002981336 
Protein GI241662976 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.160501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT CCACCGCCGA AGTCGTGCGC GAATACGGCC CCTTCCCTGG CTCAGAGAAC 
GTCGGCGGCG TGACCTACGA TGGGCGGCAC GTCTGGTTTG CTGCCGGCGG TCAGCTGAAG
GAACTCGACC CCGACAGCGG CAAGACGCAG CGCTCCATCG ATGTACCGGC CCATGCCGGG
ACCGCGTTCG ATGGGCGGCA CCTGTTCCAG ATTGCCGAAG ACCGCATCCA GAAAATCGAC
CCGCAAACGG GCACCGTGCT CGCCACGATT CCGGCGCCGG GCGCGGGCGG AGACTCGGGC
CTCGCCTGGG CCGAAGGCAC GCTGTGGGTC GGCCACTACC GCGAGCGAAA GATCCGCCAG
ATCGATCCGG ACACCGGCAA GGTATTGCGC ACCATCGAAT CCAACCGGTT CGTTACCGGC
GTCACGTGGG TCGACGGTGA GCTCTGGCAC GGCACTTGGG AAGGCGATAC GAGCGAGCTG
CGGCACATCG ATCCGCAAAC CGGTGAAGTG CTGGAGCAGC TTGACATGCC GGCCGGCATG
AACGTGTCGG GTCTCGAGTC GGATGGCGCC GATCAGTTCT TCTGCGGCGG CGGAACCACC
GGGAAGATTC GCGCGGTGCG ACGCCCCCGC AAGCAGGCGG CATAG
 
Protein sequence
MKRSTAEVVR EYGPFPGSEN VGGVTYDGRH VWFAAGGQLK ELDPDSGKTQ RSIDVPAHAG 
TAFDGRHLFQ IAEDRIQKID PQTGTVLATI PAPGAGGDSG LAWAEGTLWV GHYRERKIRQ
IDPDTGKVLR TIESNRFVTG VTWVDGELWH GTWEGDTSEL RHIDPQTGEV LEQLDMPAGM
NVSGLESDGA DQFFCGGGTT GKIRAVRRPR KQAA