| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1355 |
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| Symbol | lpxB |
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| ID | 8019000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1436441 |
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| End bp | 1437574 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830135 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002981316 |
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| Protein GI | 241662956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCCG GCGAGGCTTC CGGCGATTTG CTGGCCTCGC TGCTGCTGAA GGGGCTGCGC
GCACAACTGC CTGCCGACAT CGCCTACAAC GGCATTGGCG GTGCGCGCAT GACGGAGCAG
GGTTTCCAGT CGAACTGGCC GATGCACAAC CTGTCGGTGA ACGGCTACGT GGAAGTGCTT
GGCCAGTTGC GTGAGATTCT CACGATCCGC AAGGAACTCA AGCAGAACCT GCTGACTGCG
CCCCCCCTGG CGTTCATCGG CGTGGACGCA CCCGACTTCA ATTTCAACGT CGAGATCGCC
ATGCGGCAGG CGGGTGTGCC GGTGGTGCAC TTCGTGAGCC CGTCGATCTG GGCGTGGCGA
GCGGGCCGTA TCAAGACGAT CGCCCGCGCC GTCGACCATA TCCTCTGCCT GTTCCCGTTC
GAGCCGGAGA TTTACGCCAA GGCCGGCATT CCGGCCACGT ACGTCGGGCA TCCGCTTGCG
GACGAGATTC CGCTGGTGCC GGACGTTGAG GGCGCTCGCA CCCGCCTGGG GCTGCCGTTG
GGCCGCAAGG TCGTTGCGGT GCTGCCGGGC AGCCGCAATT CCGAAGTGAA GCATCTCGGG
CCGACGCTGT TTGCGGCGAT GTCGCGCATG CAGGCGGTCG AGCCGGAACT GGCGTTTGTG
CTGCCGGCGG CCAATGCGAC GCTGCGCGAG CGCATCGATG CCATGCGCGC GGAGCATCCG
GGCCTGCATC TGTGGGTCGT CGAGGGACAG TCGCACGCAG CCATGGAAGC GGCTGACGTG
ATCCTGCTGG CCAGCGGCAC GGCCACGCTG GAAGCGGCGC TGTACAAGAA ACCGATGGTC
ATCACCTACA AGGTGCCCTG GTTGACCGCG CAGATCATGA AGCGCAAAGG CTATCTGCCG
TATGTTGGGC TGCCGAACAT CCTGTCCGGC CGCTTTGTCG TGCCGGAACT GCTGCAGGAT
GACGCGACCC CCGAGGCACT CGCGCGCGAA ACGCTGCTGC AACTCAGCGA CCATGGCAAC
GCCACGTTCC TGCGTGAACA CTTCACGCAG ATGCACCTGA CGCTTAAGCA GAACATGGCG
GAGATTGGAG CGAAAGTCGT TGTCGATCTG CTACGCAGTC GCAGTAAGCT TTAA
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| Protein sequence | MVAGEASGDL LASLLLKGLR AQLPADIAYN GIGGARMTEQ GFQSNWPMHN LSVNGYVEVL
GQLREILTIR KELKQNLLTA PPLAFIGVDA PDFNFNVEIA MRQAGVPVVH FVSPSIWAWR
AGRIKTIARA VDHILCLFPF EPEIYAKAGI PATYVGHPLA DEIPLVPDVE GARTRLGLPL
GRKVVAVLPG SRNSEVKHLG PTLFAAMSRM QAVEPELAFV LPAANATLRE RIDAMRAEHP
GLHLWVVEGQ SHAAMEAADV ILLASGTATL EAALYKKPMV ITYKVPWLTA QIMKRKGYLP
YVGLPNILSG RFVVPELLQD DATPEALARE TLLQLSDHGN ATFLREHFTQ MHLTLKQNMA
EIGAKVVVDL LRSRSKL
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