Gene Rpic12D_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1332 
Symbol 
ID8018977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1406153 
End bp1407073 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID644830112 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002981293 
Protein GI241662933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.748197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.92031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA TAGCCTCATC GGCGGACGCT TCCGCTCACC ACGAGCCGCA ATGGGCGGCT 
GCACTGTTTA TCCTCCTGGG CGCCTCGGTC TGGGGCATTT CCTGGTACCC GTACCGCCTG
CTGGCCGGCT GGGGGCTCGG CAGCATGCTG GCTTCGTCGA TGACGGGCGC AGCTGCAGCC
GTGCTGGCCG CCATAGTGCT GCGTCGTCAC TTTCCGACGT TTCAATGGTC GTGGCTGATT
CCCGCGCTCG GGCTCGCGGC GGGCATCACC AACGCCGGTT TCGTCTGGGG CACGGTGCAC
GGCACGGTCA TGCGGGTACT GCTCCTGTTC TATCTGACCC CGGTATGGAC CGCCCTGCTG
GCGCGCCTGT GGCTGCACGA GCGCCTGGGC TGGCGCGGCG GTGTGCTGCT CGCGCTGGCG
TTGTCGGGCG CGATGATGAT GCTGTGGTCG GGCCAGGCCG GCACGCCATG GCCGGGCTCA
GCGGCGGAAT GGGCGGGGCT GATTGCGGGG CTCGCTTTTG CGTGCAACAA CGTGCTGTCC
CGCCTGGCGG GGCAGCGTCA TCCGACCATG CGCCCGGAGA TGCGGACCGT GGTCGTCTTC
ACCGGCTGCG CGCTGGTGGG CTTTCCGGCT GCGCTGATGC TGGATGGCGT GCGCACGGTG
CCGGCGGCTT TCTCGCAGAG CAATACGTGG CTGCTGCTGG CGGGCATGGC CTGCGTGCTG
GTCGGCGGCA ATGCGATGGT GCAGCGCGGC CTGCAACGCT TGCCGGCCAA TCGTGCGGCG
CTGCTGATGC TGTTCGAAAT CGTGGTGGCG GCCGCGTCAT CGGCGCTGCT GACGGCGGAA
CGCCTGTCCC CCCAGGAGAT GGCGGGCGGC GCCTGCATCA TCCTGGCAGG CGCGCTGTCG
GGGCTGTCCC GGCGCAAGTA G
 
Protein sequence
MTSIASSADA SAHHEPQWAA ALFILLGASV WGISWYPYRL LAGWGLGSML ASSMTGAAAA 
VLAAIVLRRH FPTFQWSWLI PALGLAAGIT NAGFVWGTVH GTVMRVLLLF YLTPVWTALL
ARLWLHERLG WRGGVLLALA LSGAMMMLWS GQAGTPWPGS AAEWAGLIAG LAFACNNVLS
RLAGQRHPTM RPEMRTVVVF TGCALVGFPA ALMLDGVRTV PAAFSQSNTW LLLAGMACVL
VGGNAMVQRG LQRLPANRAA LLMLFEIVVA AASSALLTAE RLSPQEMAGG ACIILAGALS
GLSRRK