| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1282 |
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| Symbol | |
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| ID | 8018927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1355748 |
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| End bp | 1356632 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830062 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_002981243 |
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| Protein GI | 241662883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.080295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.395871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA TGCACACCAC AGCAGTCGCA CAATTTCTCG GCACGCTGCC GAACGCGCCC
GCGCCAGATC GCCACTTGTG GCGTGATGCC GCGGGCCGCG TGCAGGGTCA GTTCTTCCAC
TGCGCGCTCA CCAGCCTGTT TGAACCGGTC TGGCAGCTTG CCGCCGATGG CGCCTTGACC
CTTGCGGGCC ACGAAGCCCT GATGCGCACC TGGACGCGCG ACGGCGATCT GGGCCTGAAC
CCGTGGAAGG TGTTTTCGCT GGCGTCGGAT GACAGCACGC TGGTCGAACT GGACCGCCTG
TGCCGGCTGG TGCATACGCT CAACTATTTT TCGCGCACCG ATGCGGGGCG ACTGGTCGTC
AATGTGCATG GCCGGTTGCT GGCAGCGGTG GCGGCCGATC ACGGCAAGGC ATTCCACCGT
GCGGTGACGG CGCTGGGGCT GCACCCGGAG CAATTCGTCA TCCAGGTGCC GTCCACAGCC
AATGACGATC TGGGGCTGCT GCTCTTTGTG GTCGACAACT ACCGGCGCAA CGGTTTTGCC
GTGGCGGTGC AGGCATCGGA CCCGGCGGAA GCCGGCGCGC TGCTCGTGCA TGCCCGGCCC
GCCTATCTGA AGCTCGATGC ACGGCGCGAC TGGCGTACAC GAAACGTGGT GTCGCTGGCC
GATTCGGCAC GCGAGCTGGG CGTGACGCTG GCCTTGCGGC GCTGCGAGCG CCCGAGCGAC
CTGGAACTGG CCCGTGCCGC CGGCATCACG TATGTGCAGG GCAGCATCCT GCCCGGCGCG
GAATCGGAGC CGGAACCTGC GCCCACTCCA CAGGTGGTGC CGATGGCGCA GGCCCCGCTG
GTGCAACAGC AGCAAAGCGC CACCGGCCTT TCTCTGACGC AGTGA
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| Protein sequence | MSLMHTTAVA QFLGTLPNAP APDRHLWRDA AGRVQGQFFH CALTSLFEPV WQLAADGALT
LAGHEALMRT WTRDGDLGLN PWKVFSLASD DSTLVELDRL CRLVHTLNYF SRTDAGRLVV
NVHGRLLAAV AADHGKAFHR AVTALGLHPE QFVIQVPSTA NDDLGLLLFV VDNYRRNGFA
VAVQASDPAE AGALLVHARP AYLKLDARRD WRTRNVVSLA DSARELGVTL ALRRCERPSD
LELARAAGIT YVQGSILPGA ESEPEPAPTP QVVPMAQAPL VQQQQSATGL SLTQ
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