Gene Rpic12D_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1230 
Symbol 
ID8018874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1304941 
End bp1305879 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID644830009 
Productprotein of unknown function DUF159 
Protein accessionYP_002981191 
Protein GI241662831 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTACT CCGCCCAAAT CGAAGCCGAC TATCGACGGT TCGTACACGA GTACGGCGCC 
ATCATGTCGC TCGACGAATT CACGCGGATG GTGATGGAGT ACTTCGCCAA CCCGAAGATG
CGCGTGCCGC GTGCGATGAC CGCGCACTTC CTCGAATCGC CCGAGACAGA AGAAGAAAAG
AAGATCGCCG AGGTCATCCG CGCGCGCATG GCCGCAGACG AAATCGCGCT GCTGCAGGAG
CTGGCCAAGC AGACCGAACG GCTGGAGAAA GCGCAGCAAT CCCTCGCTGC CAAGGCCACC
AAGAAAGCCG CTGAAGACGT CCGCATCGCC ACCAACAAGA TCGCGGCGGC CAAGGGCAAA
CTCGAAGAGC TCAAGAGCAC CGAGCTCAAG CCGCGCGACT CGCGCATCTA CCCCGGCTGG
TACGCGCCCG TGATGATCAT GGAGAACGGC CGGCGCGTCG TCAAACCGAT GCGCTATCAG
TGCCGCCCCG CCGGCAAACC AGCGTTCTAC GACGAACAGT ACCCTGGCAC CTACAATGCC
CGTCGAGACA ACCTGCGCGG CTTCTGGAAA GGCCAATACG GCCACACGCA CGGCCTGGTC
CTGGTCGACG CGTTCTACGA GAACGTGACA GGGCCAGACG GCAAGAACGT CGTGCTCGAA
TTCCGCCCCG ACCCGCCGCA GACGCTGCTC GTCGCTTGCG TGTGGTCACA CTGGCGCGCG
ACCAAGCCCG GCGAAAAGGA TCTGCTGTCG TTCGCCATCA TCACCGACGA CCCGCCGCCG
GAGATTGCCG AGGCCGGGCA CGACCGCTGC CCGATTCCAA TCAAGCCGGA GAACATTGAT
GCGTGGCTGA ACCCGGAAGC GCGCGGCCTC GATGCGGTAG ACGCGATTCT TGAGGACAAG
CTGTTGCCGT TCTACACGCA TCGGCAAGCA CCTTTGTGA
 
Protein sequence
MCYSAQIEAD YRRFVHEYGA IMSLDEFTRM VMEYFANPKM RVPRAMTAHF LESPETEEEK 
KIAEVIRARM AADEIALLQE LAKQTERLEK AQQSLAAKAT KKAAEDVRIA TNKIAAAKGK
LEELKSTELK PRDSRIYPGW YAPVMIMENG RRVVKPMRYQ CRPAGKPAFY DEQYPGTYNA
RRDNLRGFWK GQYGHTHGLV LVDAFYENVT GPDGKNVVLE FRPDPPQTLL VACVWSHWRA
TKPGEKDLLS FAIITDDPPP EIAEAGHDRC PIPIKPENID AWLNPEARGL DAVDAILEDK
LLPFYTHRQA PL