Gene Rpic12D_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1219 
Symbol 
ID8018863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1295326 
End bp1296915 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content66% 
IMG OID644830000 
ProductRhodanese domain protein 
Protein accessionYP_002981182 
Protein GI241662822 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.773409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGT CCGTTACCGC CCAGACCCTG AAAGCGTGGC TGCACGACGG CGCAGAGATC 
GCGCTGTTCG ACGTGCGCGA GCACGGCCAG TACGGCGAAG CCCACCTCTT CTACGCCGTC
CCGCTGCCGT ACAGCCGACA TGAGATTGAC GCCCCGCGCC TTGCGCCACG CCGCGCGGTT
CGCATGGTCG TTTATGACGA CGACGATGGC GTTGCCGATC GCGCGGCCGG TCGCCTGAGC
ACCATCGGCT ACACCAACGT GCACGTACTG CAAGGCGGCG CACAAGCCTG GGCGCAGGCA
GGCTTTACGC TGTTTGCCGG CGTTAACGTG CCATCCAAAA CTTTCGGAGA ACTCGTGGAG
AGGGCGTACC ACACGCCGCG CGTCACCGCA CGCGAACTAG CGGCCATGCT GGAACGAAGC
GACGACGTCG TCATCGTCGA CGGCCGCCCC GTCTGCGAAT ATCTGAAGAT GACGATCCCG
TCGTCGATCT GCTGCCCGAA CGGCGAACTG GGGCTGCGCA TCCGCGAGCT TGTCCCCGAT
GCAACCACCC CAATCGTCGT CAACTGCGCG GGCCGCACGC GCAGCATCAT CGGTGCGCAG
ACGCTGATCA GCCTCGGCAT CCCGAACCCC GTGATGGCGC TGGAGAACGG CACGCAAGGC
TGGTATCTGG AAGACCTTCC ACTGGAACAC GGCAGCACCC GCCGCTATCC CGATGTCGTT
GCGCCCGCTA CCGTCAAGGA CATGCGCGAG GCCAGTCAGC AACTTGCCGT GCGCTTTGCC
GTGCCCGAGG TGGATGCGGC AACGCTCGCA CGCTGGGTTG CACAAGACGA ACATAGCCTC
TACCTGTGCG ATGTCCGCAC ACCTGAGGAA TTCGCCTCTG GCAGCCTACA AGGCGCCCAG
CATGCGCCGG GCGGCCAGTT GATCCAGGCA ACTGATCAGT ACGTCGGCGT GCGCAACGCG
CGCCTCGTGC TGTTCGATGC CGACGGCGTC CGCGCGCCCA TCGTTGCCAG CTGGCTGCGG
CAACTCGGTC ACGATGCCTA TGTGCTGCGC GACGGCCTAG ACAGCCATGC GAGCCTGGCG
GTGACCACAA CAGCGTTGCC GCAGCCGTTG CCCGAGTTCA GCGCGCAAGC ACTCGCCACT
GCGCTCGCGG CCGGCACCGC ACATGTGATC GACCTGCGCC CCAGCATGAG CTTTCGCCGC
GCCCACGTGC CCGGTGCCAC ATGGGCCATT CGTCCACGCT TGCCAGCCCT GGCCCCGGAC
CGCGATACCG TGCTGATCGC CGACGACCCG CGCATCGCAG CACTCGCAGC GGCAGATTGG
AGCGCCAGAG CACCTGAGGC AGCATCGCGA CTGAACTTGC TCGCGGGCGG CATTGCCGCG
TGGACTGCCG CCGGCTACGC CACCGAAGGT TCCGACAGCG CACCGCCTGA CGCCGATTGC
ATCGACTATC TCTTCTTCGT GCATGATCGG CATGACGGTA ATAAGGCTGC GGCAAGGCAA
TACCTGGCCT GGGAAACCGG CCTGCTCGCT CAGCTCGACG CGCAGGAACT TGGCGCTTTT
CGCGTGGGCG CCGCTGCCGC GCAGCCGTGA
 
Protein sequence
MTSSVTAQTL KAWLHDGAEI ALFDVREHGQ YGEAHLFYAV PLPYSRHEID APRLAPRRAV 
RMVVYDDDDG VADRAAGRLS TIGYTNVHVL QGGAQAWAQA GFTLFAGVNV PSKTFGELVE
RAYHTPRVTA RELAAMLERS DDVVIVDGRP VCEYLKMTIP SSICCPNGEL GLRIRELVPD
ATTPIVVNCA GRTRSIIGAQ TLISLGIPNP VMALENGTQG WYLEDLPLEH GSTRRYPDVV
APATVKDMRE ASQQLAVRFA VPEVDAATLA RWVAQDEHSL YLCDVRTPEE FASGSLQGAQ
HAPGGQLIQA TDQYVGVRNA RLVLFDADGV RAPIVASWLR QLGHDAYVLR DGLDSHASLA
VTTTALPQPL PEFSAQALAT ALAAGTAHVI DLRPSMSFRR AHVPGATWAI RPRLPALAPD
RDTVLIADDP RIAALAAADW SARAPEAASR LNLLAGGIAA WTAAGYATEG SDSAPPDADC
IDYLFFVHDR HDGNKAAARQ YLAWETGLLA QLDAQELGAF RVGAAAAQP