Gene Rpic12D_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1205 
Symbol 
ID8018849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1277314 
End bp1278057 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID644829987 
Producthypothetical protein 
Protein accessionYP_002981169 
Protein GI241662809 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.50447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG CAGCGCTTCT CAGCGTTTTT CTGATTGCAT TGCTCGGCGG TGTGCATTGT 
CTGGCGATGT GCAGCGGGAT CGCGCTCGCG GCCGAACGTG GAACTGTGGC GGTACGGGTC
GTGTCGCGCC GCCGGCTATG GTTCGAGCAG GTCGTCATGC ATGCCGGCCG GTTGACCACC
TACGCGCTGC TTGGCGCAAT CATGGGTGCG ATGGGCGCGA CCTTCTGGCG CCAGCAATGG
CTGCCGATTC AACGCGGCTT GTTTGCCTTC GCCAGTGTAT TGCTACTCGC CTATGGGATT
TTGCTGCTCG TGCGTTCCGC CGGAGATGCG TGGCGCAGTG TGTGGCTCGA GCGCTTGCTC
GGCCGCGTCG CTGGCGGCCT GTCTCGGGGG GCTGCCACAC TGGGCGGCAC GCTGCAACGT
CAGCCGCCGT TCCTACGCCG CTATATCACG GGTATGGCCT GGGGACTGGT GCCGTGCGGC
ATGGTCTACG GCGCATTGGC TGTGGCGTTG CTGGCAGGCA ACGCTGCCTC CGGGGCGGTG
GTCATGCTCG CCTTTGGTGC GGGTACGCTG CCCAACCTGT TGATGATGTC TGGCTTCGCT
GGGTGGCTGC GCGGCTTGTC GCGCCGCCGG TGGGCGCGTG GCGCGGCCGG CGTCGCCATC
GCCGGGTTCG GCATATGGGG GCTGGTGCAC GCGATCTGGC TGCCAGAGAT GCTCAACGCA
CACGGATTCT GTCTGGTACT GTAG
 
Protein sequence
MSAAALLSVF LIALLGGVHC LAMCSGIALA AERGTVAVRV VSRRRLWFEQ VVMHAGRLTT 
YALLGAIMGA MGATFWRQQW LPIQRGLFAF ASVLLLAYGI LLLVRSAGDA WRSVWLERLL
GRVAGGLSRG AATLGGTLQR QPPFLRRYIT GMAWGLVPCG MVYGALAVAL LAGNAASGAV
VMLAFGAGTL PNLLMMSGFA GWLRGLSRRR WARGAAGVAI AGFGIWGLVH AIWLPEMLNA
HGFCLVL