Gene Rpic12D_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1132 
Symbol 
ID8018775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1197297 
End bp1198211 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID644829913 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002981096 
Protein GI241662736 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.534175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG CCCGCTTCGA TCTCGTCACC CTTGGCCTCT TCGTGGCGGT GGCTCGGCTG 
GGCAGCATCT CTGCCGGAGC GCGGCAATCA CATCTGGCTG TGGCCGCTGC AAGCAAGCGG
ATTTCCGATC TGGAAGCCGC CGTGGGCGCA CCGTTGCTGT ATCGCCATGC CGCCGGCGTG
GAACTGACTG AGGCAGGTCA GGCGTGCTTC CGTCACGCCG TGGGCATCTT GCAGGACGTT
GAACGTATGG CCGGTGCGCT GTCCGACTTT GCCGCCGGCA CGCGCGGGCT GGTGCGCGTG
TGGGCCAATA CCTCGTCGAT CACACAATTC CTGGCTGACG ACCTGGCCGC CTTCATGCTG
GCCAACCCGG CGATCCGCAT CGCGCTGGAA GAACAGGACA GCGGCGACAT CGTTGCCGCG
CTGCGCGAGA ACCGGGCAGA CCTTGGGATC TTCGCGGCCG GTACGCCGTG TGAAGGGCTG
CAATCGTTCG ACTACCGCGA GGACGATCTC GCCATGGTCA CGCCCCGCGG GCATCCGTTG
GCCGCGCGCA AGCAGGTTCA TTTCGCCGAC GCCTTGGACT TCGATTTCGT CAGCCTGCCG
CCGGGCACGT CGCTCGCCGC GCAACTGGTC GACGAGAGCT TGCGTCTGGG CAAGCCGTTG
CGCCTGCGCA TCCAGGTGCG CAGCTTTGAA GCCGTCTGCC GGATGGTGGC CTCCGGCCTG
GGCGTGGGCG TGTTGCCGCG CATCGCCGCA CAAAGCCATG TATCGAGCCT GCCGGGCGCC
GGTCTGGCGC TCGTGGCGCT CCAAGACGAA TGGGCGCATC GCCGCCTGCT GGTGGGCGTG
CGTGACCCCG AGGCGCTGAC CAGCTCCGCT CGCCTGTTGA TGACGCATCT GCTTGGCAAC
TCCGCCGTAC TCTGA
 
Protein sequence
MNLARFDLVT LGLFVAVARL GSISAGARQS HLAVAAASKR ISDLEAAVGA PLLYRHAAGV 
ELTEAGQACF RHAVGILQDV ERMAGALSDF AAGTRGLVRV WANTSSITQF LADDLAAFML
ANPAIRIALE EQDSGDIVAA LRENRADLGI FAAGTPCEGL QSFDYREDDL AMVTPRGHPL
AARKQVHFAD ALDFDFVSLP PGTSLAAQLV DESLRLGKPL RLRIQVRSFE AVCRMVASGL
GVGVLPRIAA QSHVSSLPGA GLALVALQDE WAHRRLLVGV RDPEALTSSA RLLMTHLLGN
SAVL