Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1132 |
Symbol | |
ID | 8018775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1197297 |
End bp | 1198211 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829913 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981096 |
Protein GI | 241662736 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.534175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTCG CCCGCTTCGA TCTCGTCACC CTTGGCCTCT TCGTGGCGGT GGCTCGGCTG GGCAGCATCT CTGCCGGAGC GCGGCAATCA CATCTGGCTG TGGCCGCTGC AAGCAAGCGG ATTTCCGATC TGGAAGCCGC CGTGGGCGCA CCGTTGCTGT ATCGCCATGC CGCCGGCGTG GAACTGACTG AGGCAGGTCA GGCGTGCTTC CGTCACGCCG TGGGCATCTT GCAGGACGTT GAACGTATGG CCGGTGCGCT GTCCGACTTT GCCGCCGGCA CGCGCGGGCT GGTGCGCGTG TGGGCCAATA CCTCGTCGAT CACACAATTC CTGGCTGACG ACCTGGCCGC CTTCATGCTG GCCAACCCGG CGATCCGCAT CGCGCTGGAA GAACAGGACA GCGGCGACAT CGTTGCCGCG CTGCGCGAGA ACCGGGCAGA CCTTGGGATC TTCGCGGCCG GTACGCCGTG TGAAGGGCTG CAATCGTTCG ACTACCGCGA GGACGATCTC GCCATGGTCA CGCCCCGCGG GCATCCGTTG GCCGCGCGCA AGCAGGTTCA TTTCGCCGAC GCCTTGGACT TCGATTTCGT CAGCCTGCCG CCGGGCACGT CGCTCGCCGC GCAACTGGTC GACGAGAGCT TGCGTCTGGG CAAGCCGTTG CGCCTGCGCA TCCAGGTGCG CAGCTTTGAA GCCGTCTGCC GGATGGTGGC CTCCGGCCTG GGCGTGGGCG TGTTGCCGCG CATCGCCGCA CAAAGCCATG TATCGAGCCT GCCGGGCGCC GGTCTGGCGC TCGTGGCGCT CCAAGACGAA TGGGCGCATC GCCGCCTGCT GGTGGGCGTG CGTGACCCCG AGGCGCTGAC CAGCTCCGCT CGCCTGTTGA TGACGCATCT GCTTGGCAAC TCCGCCGTAC TCTGA
|
Protein sequence | MNLARFDLVT LGLFVAVARL GSISAGARQS HLAVAAASKR ISDLEAAVGA PLLYRHAAGV ELTEAGQACF RHAVGILQDV ERMAGALSDF AAGTRGLVRV WANTSSITQF LADDLAAFML ANPAIRIALE EQDSGDIVAA LRENRADLGI FAAGTPCEGL QSFDYREDDL AMVTPRGHPL AARKQVHFAD ALDFDFVSLP PGTSLAAQLV DESLRLGKPL RLRIQVRSFE AVCRMVASGL GVGVLPRIAA QSHVSSLPGA GLALVALQDE WAHRRLLVGV RDPEALTSSA RLLMTHLLGN SAVL
|
| |