Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1010 |
Symbol | |
ID | 8018645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1062211 |
End bp | 1062966 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829791 |
Product | GntR domain protein |
Protein accession | YP_002980981 |
Protein GI | 241662621 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCG TCAGCTCGCC CGCAACGCTC GTGCGCCGCA CCCAAAGCTT GGCGGACGTG GTGGTGGACC ACGTCAAAGG GCGCATTGCC AGTGAATCTC TGCGGATTGG GGACAAGCTC CCCACGGAAT CCGCGTTGAT GGAAGCGCTG GGCGTGAGCC GCACGGTGGT ACGCGAGGCG ATTTCGCGCT TGCAAGCCAA GGGGCTGATC GAAACGCGTC ACGGCATCGG CAGCTTTGTG CTGCCGCCAC GCATCGACAA CAGCATCCCG CTGGGCGATG CGTCGACGAT GCACGAGATC TTGAGCATGC TGGAACTGCG CGTCGCCATT GAGACGGAAT GCGCAGGCTT GGCCGCACAG CGCATCTCCG CGGCCGAGAT CGAGGCGCTG CGTCTGGCGC TCGAAGCCAT CGAGCAGGAC CAGGCGGAGG GCAACGACAG CGCCACCTCC GACCTCCAAT TTCATCTGAG CATTGCCCGC GCCACCGGGA ACGAACATTT CGTGGGCGCC CTCGCCCAGC TCGGCAAGAC GCTCATTCCC CGCACGCGGA TGGGGCTGGC GCAGGTCGGC TATCTGAACG CGCCCGAACT GCGCGCCACG GTCAACCGCG AGCACCACAG CGTTTTCGAA GCCATTGCGC GGAAAGATCC CGAAGCCGCT CGCGCCGCCA TGCGCATGCA CCTGTCAAAC AGCCGCGAGC GTCTGCGCCG GGCGCACGAA GCGGCTGGCA GTCAAAAGAC CGCAACAGGC AGCTGA
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Protein sequence | MPTVSSPATL VRRTQSLADV VVDHVKGRIA SESLRIGDKL PTESALMEAL GVSRTVVREA ISRLQAKGLI ETRHGIGSFV LPPRIDNSIP LGDASTMHEI LSMLELRVAI ETECAGLAAQ RISAAEIEAL RLALEAIEQD QAEGNDSATS DLQFHLSIAR ATGNEHFVGA LAQLGKTLIP RTRMGLAQVG YLNAPELRAT VNREHHSVFE AIARKDPEAA RAAMRMHLSN SRERLRRAHE AAGSQKTATG S
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