| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0946 |
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| Symbol | |
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| ID | 8018578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 996962 |
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| End bp | 998542 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644829725 |
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| Product | ABC transporter related |
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| Protein accession | YP_002980918 |
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| Protein GI | 241662558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0516195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0273292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCG CTTACGAACC GCGCACACCG CTGCTGCGCG TCTCCGCGCT CAGCAAGCAC
TACGCCGCCC CCGTGCTGCG AGATATCGAT CTCGACGTGC ACGCGGGCGA GGTGCTTGCG
CTCACGGGGG AAAACGGCGC TGGCAAGAGC ACGCTCTCCA AGATCCTCTG CGGGCTGGAG
ACGGCAACCT GCGGGTCGAT GACGCTTGCC GGCACGCTCT ACGCGCCTGA TTCGCGCAGC
GCAGCCGAGG CGCTGGGCGT GCGCATGGTG CTGCAGGAAC TGAGCATGGT GCCGACGCTG
ACAGTGGCCG AAAACCTGTT CCTCGGCGAA CTCCCCCGGC GGCTGGGTTT CGTGGATCGC
TCTGCGCTGC GCTTTCGGGC CGAACAGGCG CTTGCGCGCG TGGGCCTGGA CCTCGACCCC
TGGACGCCCG TACACACGCT CGGCATCGGC CACCGGCAGA TGATCGAGAT TGCCCGCGCG
CTGGCCAGCG CATGCCGTGT GCTGATCCTC GACGAGCCGA CGGCGATGCT GAGCGCGCAC
GAAAGCACCA CGCTGTTCGA GCGCATCGAC GCGCTGCGCC GCGAAGGCGT GGCGATCCTC
TACATCTCTC ACCGCCTGGA CGAACTGGCG CGCATTGCCG ATCGCATCGT CGTGCTGCGT
GACGGCAAGC TCGTCACCGA TGCGCCGGCT GCGACGGTCA CGCAGGATGC GCTGATCCAG
GCGATGGTCG GTCGCGACGT GGCCGCCTCG TCCGAAACGC AGCGGGCCGC GCGCGAACCG
TGGCCCGGTG ACGGCTCACC GGCGCTGCGG GTGACCGGGC TGACGCGTGC CCCGGCTGTG
CGCGAGGTGA GCTTTGACGT GGCGCCGGGA GAAATCTTCG GCATCGCGGG CCTGGTCGGT
GCGGGGCGCA CGGAACTGCT GCGGCTGATC TTCGGTGCGG ACCGCGCGGA TGCGGGCAGC
GTCGAAGTCG GCTCGCCGCT GGCGGCAGTG CGCATCCGTT CGCCGGGCGA CGCGGTGCGC
CACGGCATCA GCCTGCTCAC CGAGGACCGC AAGGACGAAG GCCTGATGCT GAGCCTGCCC
ATCGCGACCA ACATCGCGCT GGGCAACATG CCAAGCGTAA CGAAGCGAGG CTGGCTGCAA
CCGGCGCGCG AGCGGGTGCT GGCGCAGCGG CACATCGGCG CATTGCGCAT CCGTTGCGCT
GGGCCTGAGC AACCGGTCGG TGAACTCTCG GGCGGCAATC AGCAGAAGGT GGCGATTGCG
CGCTGGCTGG AGCGCGACAC GCCTGTGCTG CTCTTCGATG AGCCCACGCG GGGTGTGGAT
GTCGGCGCCA AGTTCGACAT CTACACGCTG CTCGACGCGC TGGCCGCGCG AGGCAAGGCG
CTGGTCGTGG TGTCGAGCGA TCTGCGCGAA CTCATGCAAC TGTGTGATCG CATTGGCGTC
ATGCGCGCCG GGCGGCTTAC GCACATCTTC CAACGCGGTG GCTGGAGCCA GGACGCCCTG
CTCGCCGCTG CCTTCGGTGA ATCGGAAGAA TCCGATTCAT ATGCACCTCG ATCGCCCTCG
GAGACCGCAG ATGCGCTCTG A
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| Protein sequence | MSAAYEPRTP LLRVSALSKH YAAPVLRDID LDVHAGEVLA LTGENGAGKS TLSKILCGLE
TATCGSMTLA GTLYAPDSRS AAEALGVRMV LQELSMVPTL TVAENLFLGE LPRRLGFVDR
SALRFRAEQA LARVGLDLDP WTPVHTLGIG HRQMIEIARA LASACRVLIL DEPTAMLSAH
ESTTLFERID ALRREGVAIL YISHRLDELA RIADRIVVLR DGKLVTDAPA ATVTQDALIQ
AMVGRDVAAS SETQRAAREP WPGDGSPALR VTGLTRAPAV REVSFDVAPG EIFGIAGLVG
AGRTELLRLI FGADRADAGS VEVGSPLAAV RIRSPGDAVR HGISLLTEDR KDEGLMLSLP
IATNIALGNM PSVTKRGWLQ PARERVLAQR HIGALRIRCA GPEQPVGELS GGNQQKVAIA
RWLERDTPVL LFDEPTRGVD VGAKFDIYTL LDALAARGKA LVVVSSDLRE LMQLCDRIGV
MRAGRLTHIF QRGGWSQDAL LAAAFGESEE SDSYAPRSPS ETADAL
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