Gene Rpic12D_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0892 
Symbol 
ID8018523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp930498 
End bp931544 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID644829671 
Productmethyltransferase 
Protein accessionYP_002980865 
Protein GI241662505 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.3838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA CCAAGCCGTC CGCCGATGCC TATGCCCGCC GCGCGCTGGC TCGACTGATC 
CAGCCGCAGC CCACGGTCGA TGCCGTTGGC GCGGGCTTGA CCTTCTACCA ACTCTTTACG
GAAGACGACG CTGCGCTGCG CGCCGAGGCA GAAGCCGGCC TGCTGGCACC CGCGGCCAGC
ATCAGCCCGA AGTTTTTCTA CGATGCCCTC GGTTCGCGCC TGTTCGAGGC GATTACCGAT
CTACCCGAGT ACTACCCGAC GCGCACCGAA GCCGCCATTT TCAGCCTGCA TGCGGCTGAG
ATCGCGCTGC GCGTGGGCCG CGGCGCCACG TTGATCGACC TGGGCGCCGG CAACTGCGAA
AAGGCCGCGC GCCTGTTCCG CACGCTGGCG CCGTCACGGT ATGTGGCGAT CGATATCTCG
GCGGAGTTTC TGCGCGACAC GCTGCGCGGG CTTGCACGTC AGCATCCGCA ATTGCCGATG
GTCGGAATTG GCGCCGATCT GTGTGCGCCG CTGGTGCTGC CCGATGCCGT CGGCGACGGA
CGCCGCGTGT GGTTTTACCC CGGTTCGAGC CTGGGCAACT TCACGCCGGA AGAAGCGGGC
GCATTTCTGT CGCGCTTGCA CGAAGCTTCG GCCCCCGGCG ACAGTGTTCT GATCGGCATC
GACCTCATCA AAGAGGCCCA ACGGCTGGAA GCCGCTTACG ATGATCCGCT CGGTGTGACG
GCGGCTTTCA ACCTGAACGT GCTGCGCAAT CTGAATCGCC TTCTGGGTAC GAATTTCGAC
GTGCGGGATT GGCGCCATGT CGCGCTGTAC CGCGCAGAGG CGCACCGCGT TGAGATGCAT
CTGGAAGCGC GTCGCGATGT CACGGTGCGG TGGGGCAAGC ACGCGCGGGC CTTCGCTGGG
GGTGAACGCA TGCACACCGA GAACTCGGTC AAGTACGACC TGCCCAGCCT GCAAACGATG
TTTGCCGATG CCGGCTTCGA AGACCTGCAT GCCTGGACCG ACGCCAGCGG CGACTTTGCC
GTCTGCCACG CGAGCGTGGC CCGGTAG
 
Protein sequence
MQATKPSADA YARRALARLI QPQPTVDAVG AGLTFYQLFT EDDAALRAEA EAGLLAPAAS 
ISPKFFYDAL GSRLFEAITD LPEYYPTRTE AAIFSLHAAE IALRVGRGAT LIDLGAGNCE
KAARLFRTLA PSRYVAIDIS AEFLRDTLRG LARQHPQLPM VGIGADLCAP LVLPDAVGDG
RRVWFYPGSS LGNFTPEEAG AFLSRLHEAS APGDSVLIGI DLIKEAQRLE AAYDDPLGVT
AAFNLNVLRN LNRLLGTNFD VRDWRHVALY RAEAHRVEMH LEARRDVTVR WGKHARAFAG
GERMHTENSV KYDLPSLQTM FADAGFEDLH AWTDASGDFA VCHASVAR