| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0876 |
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| Symbol | rimM |
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| ID | 8018507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 916978 |
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| End bp | 917532 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829655 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002980849 |
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| Protein GI | 241662489 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCCGG GCGTGGGCAA CAATCCGACA CTCCCAGACG ATCTCGTCGA GGTGGGTTAT
GTGGGTGGGG CCTACGGTAT TCGCGGCTGG ATCAAGGTCC AGTTGCACGG CGACGCCGAC
GCGCTGCTGA ATGCCCGCAC GTGGTGGCTC AAGCCGGCTG GCGGGGCGCT GGCAACGTCG
GCGGACTGGC GGGTGTTTCC CGTTGGCACG TCGCGTGAGC ATAGCGGCAC GGTGGTGGCG
GGTTCGCCTG CCGCACCCGA TCGCAATGTC GCCGAAGCTC TGCGCGGCTA TGCCGTGTGG
GTCAGCCGGG CCGATTTTCC CGAGCCGGAT GATGACGAGT TTTACTGGGT CGATCTGATC
GGCGCTACGG TCGTCAACGA GCAACAGGAA ACGCTTGGCA CGGTGGGAGG CCTGATCGAC
AACGGTGCGC ATCAAATCCT GCGTATCGTC GGTGAAGGTG AGGTCGAGCG GCTCGTGCCG
TTTGTCGAGG TTTACGTGAA GTCGGTGGAT GTCGCAGGCA AGCGCATCGT CGTCGACTGG
GGTCTGGATT ACTGA
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| Protein sequence | MRPGVGNNPT LPDDLVEVGY VGGAYGIRGW IKVQLHGDAD ALLNARTWWL KPAGGALATS
ADWRVFPVGT SREHSGTVVA GSPAAPDRNV AEALRGYAVW VSRADFPEPD DDEFYWVDLI
GATVVNEQQE TLGTVGGLID NGAHQILRIV GEGEVERLVP FVEVYVKSVD VAGKRIVVDW
GLDY
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