Gene Rpic12D_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0871 
Symbol 
ID8018502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp913842 
End bp914297 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content62% 
IMG OID644829650 
Producthypothetical protein 
Protein accessionYP_002980844 
Protein GI241662484 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.228797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.854551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGA CCACTCTTCA AAAAAAATCC AAGCTGCTGA CCGTGCTGCT CGCCTTCCTG 
TTCGGAAGCG TGGGCGCGCA TCGTTTCTAT CTCAAGGGCG GACGCGACTT TTGGGCGTGG
TCGCAAGTGC TTGCCATGGT GCTCGGTGTG ATTGGCGTGG CGCTGCTGTG GTCCACCCAG
CGTGCGAGCG TCCCCGGCTG GGTCTGCGCG ATGATCGGCG GGGCTTCCGT GTTGGCCGGT
TACCTGTCAG CCCTCGTCTA CGGCCTGCGC CCCGACGAAA AATGGGACGC GCAATTCAAT
CCCGACGGCA CGCCCACACA TTCGGGCTGG CCTGTCGTAC TGCTCAGCGT TCTCACGCTG
ATGATCGGCA CGGGCCTGCT CATGGCGGGC CTCGCCATCA CGTTCCAGAC GTATTTCGAA
ACGCAGGTGC AGGCAGCGAA AGAACTGTCA CAGTAG
 
Protein sequence
MPTTTLQKKS KLLTVLLAFL FGSVGAHRFY LKGGRDFWAW SQVLAMVLGV IGVALLWSTQ 
RASVPGWVCA MIGGASVLAG YLSALVYGLR PDEKWDAQFN PDGTPTHSGW PVVLLSVLTL
MIGTGLLMAG LAITFQTYFE TQVQAAKELS Q