Gene Rpic12D_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0857 
Symbol 
ID8018488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp898817 
End bp899131 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content58% 
IMG OID644829636 
Productputative ComEA-related signal peptide protein 
Protein accessionYP_002980830 
Protein GI241662470 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.853655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AGCTGTTGGC TACCGCGCTG ATGTCGCTGT CGATGCTGTC GATGTCGTGG 
GCGGCGGTAG ACTTAAATAC CGCAGACCAC GCGGGGCTGG AGACGCTGTC CGGCATTGGC
CCCAAGCGTT CCAAGTTGAT CATCGAAGAG CGCACCAAGA ATGGTCCGTA CAAGGATGCT
GCCGACTTCA AGGCGCGCGT GTCCGGCATT GGTGACAAGA CGCTCGTCAA GCTCGAGAAC
GAAGGTCTGA CGTTCGGTGC TCCGGCTCCT GCACCGGCAG CCAAGAAGGA TGGCAAGGAC
GCTAAGAAGA AGTAA
 
Protein sequence
MLKKLLATAL MSLSMLSMSW AAVDLNTADH AGLETLSGIG PKRSKLIIEE RTKNGPYKDA 
ADFKARVSGI GDKTLVKLEN EGLTFGAPAP APAAKKDGKD AKKK