Gene Rpic12D_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0794 
Symbol 
ID8018423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp823540 
End bp823956 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID644829572 
Productcation-binding hemerythrin HHE family protein 
Protein accessionYP_002980767 
Protein GI241662407 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0187514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.130272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGA TCGAATGGTC GGAGGCACTC CAACTCGGAG ACGCTGCCTC TGACGCCAAC 
CACGTCGAGT TCTGTGCGTT GCTCAATGCC GTTGCAGATG CACCGAATGC CGAGTTCATT
TCCGCGCTCG ACGCCTTCAT CGACCACACC GAGCACCACT TCGCTGAAGA GAACGGATGG
ATGGACGCGG CGGCCTTTCC CCCGCGCCAC TGCCATCGCG GCGAGCACGA CAACGTGCTG
GCGCTGTGCC GCGAAGTGCG CAAGCGCGCC GCCGCCGGCG ACATGGACCT CGGCCGCAGG
CTCGTGGCGG AGTTGCCCGC CTGGTTTGCC CAGCATGTCG ACGTGATGGA CCGCATGATG
ACGACGTATC TGGCGCAAAT GGGCAATGCG ATGCGCACCA TGGAGCACGT TGGCTGA
 
Protein sequence
MPVIEWSEAL QLGDAASDAN HVEFCALLNA VADAPNAEFI SALDAFIDHT EHHFAEENGW 
MDAAAFPPRH CHRGEHDNVL ALCREVRKRA AAGDMDLGRR LVAELPAWFA QHVDVMDRMM
TTYLAQMGNA MRTMEHVG