Gene Rpic12D_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0788 
Symbol 
ID8018417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp816410 
End bp816895 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID644829566 
Productputative transmembrane dehydrogenase (small subunit) oxidoreductase protein 
Protein accessionYP_002980761 
Protein GI241662401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0447372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.202224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCC GTTCCCATGA TCCCGACACC CCTGCCGGCT TGACGCGCCG CCAGTGGCTG 
CAGGGCACAC TCGCGTTGGC CGCGGCCGGG CTGGCGGGCT CGCAGGTGCT GCGCGCGGTC
GCCCAGGGCC CGACTGAATC GCTCGATGCA TTCATCGCGT TGTCACAGGC GCTGACGGCA
CGGCCCGCGC TGGATCGCGG CGTGGGCACG CGGTTGCTGG CGGCGCTTGG CAAATCCAGC
GCCGACTTTG CCGCGCAATT GCGGCCGCTG GCGCAGGCGT TGGCAGTGGG CTCGCTTTCC
GATGCGCAGC AGAAGACCGC GCTGCAGATT CTGGAAGCGT GGTACTTGGG TGTGGTCGAC
GGCAATGTCG TCACGTACGA GCAAGCGCTG ATGTATAGCG TGGTTTCAGA CACGCTCGTC
ATCCGCACGT ATTGCCCCAA CCAGCCCGGC TTCTGGGCCG AGCCCCCCGT CGAGAGGCAA
GCCTGA
 
Protein sequence
MISRSHDPDT PAGLTRRQWL QGTLALAAAG LAGSQVLRAV AQGPTESLDA FIALSQALTA 
RPALDRGVGT RLLAALGKSS ADFAAQLRPL AQALAVGSLS DAQQKTALQI LEAWYLGVVD
GNVVTYEQAL MYSVVSDTLV IRTYCPNQPG FWAEPPVERQ A