| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0715 |
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| Symbol | |
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| ID | 8018342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 747011 |
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| End bp | 748045 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644829491 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_002980688 |
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| Protein GI | 241662328 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.701582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATC GCCGACAAAC CGGCCTCTCA CTAGTTGAAC TCATGGTCGG ACTGACCCTG
GGTTTGCTGC TCGTGGGCAT TGCCGTTTCG ATCTATCTCT CGGGTCGTCA AACATCGCGC
GTGGTTGATA CGGTGGGGCG CTTGGAGGAA AGCGCCCGCT TTGCGGTTGA GGCGATCGAG
CAGGACATCC GCATGACCGG TTTTCGCGGT TGTAACGGCA TGGCCAACTC GCCGGTCAAT
ACCCTGAACT CGCCGGGCTC CTTTAATAAT CGATTTGATC AGACGCTTTT TGGTTACCAC
GGTAGTGGAT CAACGTGGAC GCCTGCGCTC GATACGAGCA TCAGCAGCCT TCCGCAACCT
CCGATTGCGG GGACAGACGT CATTGCCATC AAGCGCACCT ACGACAATGG CGCTGCATTA
ACTGCGCAGA TGGCGGGAAC AACTGGTGCG GTGACGGTGG AGGCAAGCGC GCCGTTTGCT
CAGGGTGACT ACATCCTCGT CGCCGACTGC GATGCTCAAG CGGTCTTTCA GGCGACGCAG
GTCACGAGCA GTCCAACGAC TGGTTCGCTG TCGCACGCAG CCGTTGCTGT GCCAACGCCT
GGCAATGCCA GTGCGGATCT CACGCATGTC TTCAACACGG ATGCTTCGGC GTACCGTGTC
GTGACCAAAA CCTATTTTGT TGCCAAGAGT GCCAGGAACA AAGCGGTGAA CTCCTTGTGG
TCTTACAGCG TGCCTGACTA CACGGGTGCA GGTCAGCCCC AGGAACTGGT TGAGGGTGTT
GATAACTTGG TTCTTCTCTA TGGGGAAGAC ACCGACAGCG ACCAGGCTGC GAACCGCTAC
GTCACAGCCG ACAACGTTGG TAACTGGAAC AACGTCGTGA GCGTGCGAGT GCAACTCTTG
ATGGCATCGG TTCAGAACGG CGTATCGCCT ATTTCGCAGA CCTACAACTT TAATGGTGCC
TCGGCGACAT CTGCCGACAG ACGCATACGC TCGGTCTTCA CGAGCGTCAT TACGCTGCGC
AACCGGGTGA TGTGA
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| Protein sequence | MMNRRQTGLS LVELMVGLTL GLLLVGIAVS IYLSGRQTSR VVDTVGRLEE SARFAVEAIE
QDIRMTGFRG CNGMANSPVN TLNSPGSFNN RFDQTLFGYH GSGSTWTPAL DTSISSLPQP
PIAGTDVIAI KRTYDNGAAL TAQMAGTTGA VTVEASAPFA QGDYILVADC DAQAVFQATQ
VTSSPTTGSL SHAAVAVPTP GNASADLTHV FNTDASAYRV VTKTYFVAKS ARNKAVNSLW
SYSVPDYTGA GQPQELVEGV DNLVLLYGED TDSDQAANRY VTADNVGNWN NVVSVRVQLL
MASVQNGVSP ISQTYNFNGA SATSADRRIR SVFTSVITLR NRVM
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