| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0712 |
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| Symbol | |
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| ID | 8018339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 744293 |
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| End bp | 745225 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829488 |
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| Product | hypothetical protein |
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| Protein accession | YP_002980685 |
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| Protein GI | 241662325 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.703119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCGGC TCTCTCATGC TCGGCGGGGC GCGACGCTTG CGGAGTTGCT GATCGGCACG
CTGGTCGGGC TGATCGTGCT TGGCATCGCG CTGCAACTGA CACTCCTGGC CCGTGCAAGC
TATCAGCGCG TTGCCGACGA TGCCCTGATC GAAAGCCGCG GCACGCAAGC GCTGGAATTG
CTGACAATGG CACTGCAGCA TGCAGGGTGG GCAACCGATA CGCCAGCAGC ATCGCCAGAG
CGCCGATGGC CAGACGCGAA GGCGACGCTA TCGATTCAAG GTGCGGACAG TTGCACCCCT
CCCGAAACGG AAGTCCTTGG CTGCAACGGC AGTGGCATCC GAAACAGCGA TGCCGTGCTG
GTCCGCTTTG CTGGCCGCAG CATGCATGCC AACCCGCAGC GAGCTGACGA CAGCATCATC
GATTGCTCCG GCTACGGGGT CGCTGAGCCG GTTCAAAACG GCGGCGACGA CCAGCGCGCG
GGATACATGC TGCTTTATCT CGCCCGATCG ACGGATCAAG AACCGCAGCT CATGTGCCGC
TCGCGAAGGC ATCAAGCCGG TCAGACTGTG GGGGGCCGTT GGACATCTAA TAGCATGGTC
CGCGGCGTCG AAACAATGCA GCTTCTGTAT GTGGTTCGCT CCCCCGGCGG CACCTCGAGC
ACGACACTGT CCGCGCGGTC GCTCACTACC GAGCAATGGC GCCAGGTTCA AGCCGTGCAC
ATCGCGCTGG TCGTTCGCGG CGAATACAAC ACGCCCAGGT CAGCCAACAA GGCCACGTCC
ACACTCGCGC TATTTCCCGA CCTCAAGCGA GTTGAAGGCG CCGACGCACA GGACTTGCAC
TTCACGCCAA CCGAACCCCA ACGCCGTCGT GCCGTTTTCA CGGCAACGGT ACGCTTGCGC
AATCCACTCG CCTGCGATGT GGACGTATGT TGA
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| Protein sequence | MCRLSHARRG ATLAELLIGT LVGLIVLGIA LQLTLLARAS YQRVADDALI ESRGTQALEL
LTMALQHAGW ATDTPAASPE RRWPDAKATL SIQGADSCTP PETEVLGCNG SGIRNSDAVL
VRFAGRSMHA NPQRADDSII DCSGYGVAEP VQNGGDDQRA GYMLLYLARS TDQEPQLMCR
SRRHQAGQTV GGRWTSNSMV RGVETMQLLY VVRSPGGTSS TTLSARSLTT EQWRQVQAVH
IALVVRGEYN TPRSANKATS TLALFPDLKR VEGADAQDLH FTPTEPQRRR AVFTATVRLR
NPLACDVDVC
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