| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0709 |
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| Symbol | |
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| ID | 8018336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 742538 |
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| End bp | 743110 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829485 |
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| Product | putative type 4 fimbrial pilin related transmembrane protein |
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| Protein accession | YP_002980682 |
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| Protein GI | 241662322 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.365912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.664786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGT CTCGTCTGCG GGCCGGCTTC ACGCTGACTG AGCTCGTCGT CGTCCTGAGC
GTGATATCGA TCCTTGCGGT GTTCGCCGCG CCCGCAGCGT TGAATTGGTG GCAACGCGAG
ACCGTCGTCG TTCTGGCCGA CCGCTTTGTC AGCGCGATCT CGCTGGCGCA GACCATGTCG
CGCGATCAGC GTGCGTGGGT CCACCTCGGC CCGTCCAACG CTGGGCAAGG CTGGTCGTCG
GGATGGGCGA TGTATATGAC GCCCTCGCCG CAAACGCAGG CGACGCCCCT TGAACCCGGC
ACCCAAGATA TCTTGATGCG CGTGTCGCCG CCTGTGATGC CGCCCGTCGA ATTTGCGTTC
ACGGCGTCAC AGCAGGATGT CGACACCCTC TCTTTTGCAC CTGTGGGATA CTCGCGACAG
CGCAACGGCA GCCAGCTCTA CGGCACGCTG ACAATCCGAT CTGGAGCACA TGAGCGGCGG
GTCCGTATCA GTTCCGCAGG CCGCGCCCGC ATCTGCGATC CGGCCAAGGA CACCAAAACG
TGCGGCACTG GCGCCTCGGC TAACAACGAT TAA
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| Protein sequence | MNASRLRAGF TLTELVVVLS VISILAVFAA PAALNWWQRE TVVVLADRFV SAISLAQTMS
RDQRAWVHLG PSNAGQGWSS GWAMYMTPSP QTQATPLEPG TQDILMRVSP PVMPPVEFAF
TASQQDVDTL SFAPVGYSRQ RNGSQLYGTL TIRSGAHERR VRISSAGRAR ICDPAKDTKT
CGTGASANND
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