Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0697 |
Symbol | |
ID | 8018323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 727012 |
End bp | 728868 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829472 |
Product | integrase family protein |
Protein accession | YP_002980670 |
Protein GI | 241662310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCT CAGACTTGGT GGTCCGCCAA GCCAAGGCCA CCGGCAAGGC TTACACCCTT CCAGACATCG ATGGTCTCTC CCTGGCCGTG ACGACCACGG GTAGCAAGAG CTGGCACTTC CGTTACTACT GGATGAAGGA GCCCAAGCGC ATGTCGCTGG GCACCTATCC CGAGGTGTCC CTTCGTGAGG CACGCGCCCT GCGTGACGAG GCACGCGCCT TGGTGGCCAA GGACATCAAC CCGCGTCTTC ACCGCAAGCA AAAGCGCGCC GCGGTCAAAC TCGCTGGTGA AAACACCTTC GAGGCGATCT ACAAGAAGTG GCTTGCACAC CGCGAACTCG GCCTCAAGAA GGGCCGGCAG ACCACGCTCT CGATCCTCCC TCGCGTCTTC GCCAAGGATG TGCTGCCCTT GCTGGGCAAG CGCTCGATCT ACGACATCAA ACGCCCTGAC TTGCTGGAAG TGATCGCCAG GATTGAGCGG CGCAAGGCGC TCTCCGTCGC CGAGAAAGTC AGGACGTGGT TCAACCAGAT GTTCCGCTAC GCGCTGGTGG TCGTGCCGGG CTTAGAGCAG AACCCGGCCT CCGACCTCGA CGTGGTGGCG CTGCCGCTGC CCCCCGTGAA TCACAACCCG TTCCTGCGCA TGGCCGAGTT GCCGAAGCTG CTGCAGCGCT TGCGCAAGTA TCGTGGCCGG CTGCAGACCC AGCTCGGTCT GCGGTTGCTG CTATTCACCG GCGTGCGCAC GGGCGAGCTG CGCCTGGCGA CGCCGGATCA GTTCGACCTC GATCGGGGTC TGTGGATCAT CCCGCCCGAG GTCGTGAAGC AGCTCCAGGT GGACATGCGC AGGAAGCGCC AGTTGCCCAA GGACATTCCA CCCTACATCG TGCCGCTATC GGTGCAAGCC ATCGAGATCG TCCGGCACCT ACTGGAACAG TTCAAACCGG CCCAGCACTA TCTGTTCCGG CACGACAGCG AGTTGAAGAA GCGCATGAGC GAGAACACGC TCAACGGTGC GCTCAAGCGC ATGGGCTATC GCGACCTGCT GACCGGGCAC GGCATCCGGG GCACGATGTC CACCGCGCTC AACGAGATCG GCTACCCGAA GGTGTGGGTG GATGCGCAGC TCTCGCACGT CGATCCCAAC AAGGTCAGCG CCACCTACAA CCACGCCGAG TACGTCGAGC AGCGGCGGCG GATGATGCAG GACTGGGCCG ACCGGCTCGA TCTCTTCGAG CAGAACATGG TCGAAGCAGC GAGCATGCCG CTCACCATTC ATCTGGAGGG CGTACCCGTC CTCTCGGACG AGGAAGCCGC GAGCGCGCCA CCCAAGGCAG CGGCCACGTC GGCGCCGCTC CTGATCGTGA CCAAGCCGGG AGACGCGATG CCACTGGTGT CGGCCGAGAC GCATCGGCTG CCCGCAGTGC CGTTGCCGCG CTCCGTCATG GAGGAACCGC TGTCCGACAT TCAGCGCCAG CGGATGGAAC TGGTCGATGT CTTCGAGGCA CCGCACAACC TGCCAGTCGC CGAGTACGCG AAGATGGCGG GCAAGTCCCG CCGGTGGATC AGCTACGAGA TCAAGGCCGG CAACCTGCTG GCGCTGAACC TGGGCAACCG TGGTCAGCGC GTGCCGGATT GGCATCTCGA TCCGGTCAAG CACGCGCTGA TCCAGGCGGT CCTCAAGCTG ACCAGGGGCG CCGACCCTTG GCAGATCTAC AACGCGCTCC TGCAGCCGCG CGCGATGCTG CGCGGCCGCT CGGCCCTGGA AAGCGTCAGC GCCACGAATC TCGACAAGAT CATCATGGCG GTGAGCACGA CGGTGAAGGA AAGCGAGTGG TCCCCGCAGC AGGTGGCGTT TGCGTAG
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Protein sequence | MALSDLVVRQ AKATGKAYTL PDIDGLSLAV TTTGSKSWHF RYYWMKEPKR MSLGTYPEVS LREARALRDE ARALVAKDIN PRLHRKQKRA AVKLAGENTF EAIYKKWLAH RELGLKKGRQ TTLSILPRVF AKDVLPLLGK RSIYDIKRPD LLEVIARIER RKALSVAEKV RTWFNQMFRY ALVVVPGLEQ NPASDLDVVA LPLPPVNHNP FLRMAELPKL LQRLRKYRGR LQTQLGLRLL LFTGVRTGEL RLATPDQFDL DRGLWIIPPE VVKQLQVDMR RKRQLPKDIP PYIVPLSVQA IEIVRHLLEQ FKPAQHYLFR HDSELKKRMS ENTLNGALKR MGYRDLLTGH GIRGTMSTAL NEIGYPKVWV DAQLSHVDPN KVSATYNHAE YVEQRRRMMQ DWADRLDLFE QNMVEAASMP LTIHLEGVPV LSDEEAASAP PKAAATSAPL LIVTKPGDAM PLVSAETHRL PAVPLPRSVM EEPLSDIQRQ RMELVDVFEA PHNLPVAEYA KMAGKSRRWI SYEIKAGNLL ALNLGNRGQR VPDWHLDPVK HALIQAVLKL TRGADPWQIY NALLQPRAML RGRSALESVS ATNLDKIIMA VSTTVKESEW SPQQVAFA
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