Gene Rpic12D_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0688 
Symbol 
ID8018314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp719224 
End bp720627 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content69% 
IMG OID644829463 
Producthypothetical protein 
Protein accessionYP_002980661 
Protein GI241662301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.635205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGT CCCTTTCCCG TTTCGCACAG CGCGCCAGGC CCTACGCGCT CAGCATCGCG 
CTCGCCTGCG CCGTCACGGC CGCAGCCGGC GTCGCCTGGG CGCAGACCCG CATCGGCCCC
ACCGGCGTCG GCGTGAGCGG CAGCGTCATC GGCGACGACG TGCTCTACAG CATCGGCGGC
GGCCGGGCCG TGTCCATGGG CGGCGCCGGG AACATGCAGA GCATCGGCGT GGGCATCGGC
TGGAACAGCA ACCTGATCTG CGGAAACATG AGCATCACGA CGACGCTGCA GAACCAGTTG
AACGGCCTCA CCAATGGCTT TCAGCAGATC ATGTCCTCGG TGATCCAGAG CGCCACCAGC
GCCGTGGCGT CGCTGCCGGC CCTGATCATC CAGCGTGCCG ATCCGGGCCT CTACAACCTG
CTGACCAACG GCGTGCTGCA GGCGCGGCTC GATTTCGACC GCAGCAAATT GACGTGCAAG
GCGATGGCCA ACCGGATGGC GGACATGGCC GGCGGCCAGG CCGGGTGGGA TCAGCTCGCC
GAAGGTTTCG CGCTGCGCGA TGCGGTGAGC AGCACCGATG CGGTGTCCGC CGTCGAGCAG
GCCGAATCGA ACAAGGGCAA CAACGGCGTG CCCTGGGTGG GCGGCGGCAA CGCGGGCGGC
TCGGGCCAGG GTTCCATCAA GGTGGTCGGT GATGTGACCC GTGCCGGCTA CAACCTGCTC
AACAGTCGCG GTGTCAGCGA CACCTCATCC ATCCCGCGCG CGTCCTGCGG CAACCGGCTG
ACCTGCCAAA CCTGGTCCTC GCCGCAGGCC GCAGCGGACT TCGCGACCCG CGTGCTCGGC
GAGCGCGAGC AACGCACCTG CGAGACCTGC ACCAAGACGC AGACGACGCC TGGCGTCGGC
CTGACGCCGG TGATCCAGGA AGAGTACGAG ACCAAGCTGC AGGCGCTGCA GGAGCTGGTG
ACGGGCGCGA AGCCGACGAC GGTGGCGAAC CTCGAAGCCG CCGGCAGCAA CTCGCTGCCG
ATCACGCGCG GCGTGATCGA GGCGCTGCGC GACGAACCCG ATCAAGACCT GCTCGGCAAG
CGCCTGGCGT CCGAAGCCGC GCTGTCGAGC GTGCTGGAGA AGGCCCTGCT GTTGCAGCGC
ACGCTGCTGA CCGGCAAGAA GGAGCCCAAC GTCGCCGCCA ACGAGCTGGC CGTGAAGGCC
GTCGATCAAG AGAACACCGC GCTGGAGCAG GAGATCAACA ACCTCAAGAC CGAGCTGGAG
CTGCGGCGCA CGCTGGCCGG CAATTCGGCG ATGGCGATCG TGCAGCGCCA CGGCACCCGC
GCCGCGGGCT CGCGCGGCAT CTTCGAGGGC GACACGACGC GCGACCGCCT CAAGGAAGTG
CAGAAGCCGC GGAGCGGGCC ATGA
 
Protein sequence
MKASLSRFAQ RARPYALSIA LACAVTAAAG VAWAQTRIGP TGVGVSGSVI GDDVLYSIGG 
GRAVSMGGAG NMQSIGVGIG WNSNLICGNM SITTTLQNQL NGLTNGFQQI MSSVIQSATS
AVASLPALII QRADPGLYNL LTNGVLQARL DFDRSKLTCK AMANRMADMA GGQAGWDQLA
EGFALRDAVS STDAVSAVEQ AESNKGNNGV PWVGGGNAGG SGQGSIKVVG DVTRAGYNLL
NSRGVSDTSS IPRASCGNRL TCQTWSSPQA AADFATRVLG EREQRTCETC TKTQTTPGVG
LTPVIQEEYE TKLQALQELV TGAKPTTVAN LEAAGSNSLP ITRGVIEALR DEPDQDLLGK
RLASEAALSS VLEKALLLQR TLLTGKKEPN VAANELAVKA VDQENTALEQ EINNLKTELE
LRRTLAGNSA MAIVQRHGTR AAGSRGIFEG DTTRDRLKEV QKPRSGP