| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0645 |
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| Symbol | |
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| ID | 8018271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 678981 |
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| End bp | 681893 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829420 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_002980618 |
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| Protein GI | 241662258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0794164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCT GGCACACAAC CTACCTTGGC CTGCGAGAGC TGCCAAGGGA AATCAGCACC
TTCGAGCTTC AGTCGTTTTT CACGTACAGC CGTACTGAGC GCGAGCTCAT CAACGCCCGC
CGAAGCAACG CCCACAAGCT GGGTCTGGCA CTGCACATAG GTTTCTTGCG CTTGAGCGGG
CGCCTGCTGA ATTCGGTGCG CATCGTTCCG ACAACCCTGT GGCGCCATCT GGGTGACGAA
ATCGGCATCA CTGCTGTTGA ACTGGCATCC CTGCGAGCCC TGTATGTTCG CGGTCGAACC
CTCTTTGACC ATCAACAACT GGCCTGTGAT GTCCTGGGGT TTCATTGGAT GACGGAGCAC
CAACGTCGCG CCCTGGTACG CACCCTGCGC GATGAGGTGG CCCGCTGCGC CGATCGGGAT
CAATTGCTCG TATTCGCTCG GCGCTGGTTG TATCAAAGCA AGATCCTGAT CCTGCGCGAC
CGTGACATCC GTGTCCTGGT CACAGCGGCG CTGGGACAAC TCGAAGAAGA AACAGCCAAA
ACGATTGCGG CATCTGTGCT GCCCGAACAA CTGGTGCGCT GGCGGGATGC CATGGCCGCA
TTGCGCCCGG ATGGGCAAAC CCAGCAGAGC TGGTTGTGGT CGGCACCGGC CAAACACTCA
ACCAAACAAA TTGGCGAGGT GTTCGAGCGA ATCGAACTGC TGTACGCCCT GAATGTCCAC
AAACACCTGG ACGACCTGTC CGGTCTCATT GTGCGGCGCT ATGCACGCCG CCTGGCTTCA
AGGCCTCCCT CGGTGGGGGC CAGGATCAAA GAACCCGCTC GCACAGTGGA GGTTGGCTGC
TTTTTACGGC ACTGCCTGTT TACCAGCACA GACCAAGCTA TCTTGATGGT TCAGCGGCGC
GTTGCCGATC TTTGGCGCAC GGTCGCAGCA GGTGTCACGG AGACGGTCAA TTGGGCTGAC
CTGTACAAGA CATTGCTGGC AGAGCTGGCT GGTTTGGTCG CCCAGGGTGA ACTTCAAGAC
GCGGAGTTGC GGGCTCGAAT TGTTGCCCTG CTCAGTGCCA GCCAGCAAGG CAAACCACCC
AGCCGGGCCT CGGTGGTGCG TGAGCGTTTG TTTGACGCCA TACGTCCCGT GCGCTCTTTG
CTGGCCGAAA TCACCAAGCT GCCCTGGCAG GCCAATAGCG AGCACCCGGT GACCACAGCC
TTGGCCCAAT TGACGAAACT GTACGCGGGC AAACTTCGCG AACTACCTGC TGATGTCAGC
GCCCCTCGCT TGGGTTCGGT CTGGAGCGGC GCGATTGCGG GTGCCGACCG GGAGCGCGCG
TTTCGGGCCT TGGAGGTGGC CACCCTGTTT TCATTGCGAC GTGCCGTGCG CAACGGTTCG
GTGTGGATTG AGCACAGCCT GAGCTTTCGT GGCCGCGCAC GCCTGTTCTT CACTGATGCG
CGCTGGCAGG AAGAAGCCAA ACGGCACTAT GCCCGACTGT CACTGCCAGC CAATGCATCC
ACACTTTTGA AGCCGTTGCT GGCCAAGGTA CGCGCCGGCG TGGAGGCAGT GGCCGTCGCC
GCGCGCAGCG GTGTGCTGCG CGTGGACGAA GAACTCCACC TTTCAGTATT GCCGGCAGAG
GATGAAGATC CAGAGGTGAT TAAGTTGAGG GCCAAACTTG ACCTGAGGAT CGGTGAGGTG
CAACTCCCAG AAGTGATCCT GGCCGTTGAC GCTCAGGTAC GTTTCAGCTG GATCATGCTT
GGCCGCGAGC CACGTTCGAC AGAAGAGCTG CTGATGGTCT ACGCCGGCAT CATGGCCCAC
GGCACCAGTC TGACGGCGGC CGAATGCGCC CGTATGATTC CGCAGTTGTC TGCCACCAGC
ATCCGTCAGG CCATGCGTTG GGCCGGGGAC GAGCGTCGCT TGAGTCAAGC CTGCCACGCG
GTGCTGGAGT TCATGCAACG GCACCCCATT GCAGCGACAT GGGGTCGCAC GGACCTGGCG
TCGTCCGACA TGATGAGCAT GGAAACCACC CAACGGGTGT GGCAGGCCCG ACAGGATCCA
AGACGCAACA CGTCCTCGAT TGGCATCTAC TCCCATGTGC GTGACCGATG GGGGATCTTC
TACGCGCAGC CTTTTGTGCT CAATGAGCGC CAGGCAGGGG TCGCCATTGA GGGTGTCGTG
CGCCAAGAAT CCATCGAGAC CAGCCAGTTG GCGGTGGACA CCCACGGCTA CACCGACTTT
GCCATGGCGT TGGCCCGGCT ACTGGGGTTC GATCTATGCC CACGACTGAA GGAATTGAAG
CAGCGTCATC TGTACGTGCC GCGTGGCACG ATCATTCCAC CGGAGATCGC AGCAGTTTGC
GAGGCTACCG TCGATACCGC TTTGATTGAG AAGCACTGGG ACACCTTGGT CCATTTGGCA
GCCTCGGTGA TGAGCGGCAA CGCCAGCGCA GTTGCAGCGC TGGCCAGATT TGGATCGGCG
GCGCGGGGAG ACCCCATCTA CGAAGCGGGT GTTCAGTTGG GGCGCTTGCT GCGAACTGCG
TTCCTGGCCG ACTACTTTGT CAAAGACGCC TTCAGGAATG AGCTGCGTCG GGTACTCAAC
CGGGGTGAGG CGGTCAATGC CTTGAAGCGG GCGATTTATA CCGGCAGAGT GAGCCCGGCT
CAGGCCAAGC GGGCCGAGGA AATGCAGGCG GTGGCTGACG CCTTGAGTCT GTTGGCCAAC
ATCATCATGG CCTGGAACAC AACCCAGATG CAGGCCGTTC TGGACCGCTG GGCCAACCGG
CGTCAGGTCA TCCCGGCGGA GCTCACGGGG AAAATTGCGC CGACGCGGCT GCAAGGTATC
AATTTGAGGG GCGTATTCCG CTTTCCAGTG GAGCGTTATG CCAGTGAAAT CCTGCCGTCA
CAGACCACGC CGAAAACCGG GACCGGCGGT TGA
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| Protein sequence | MQSWHTTYLG LRELPREIST FELQSFFTYS RTERELINAR RSNAHKLGLA LHIGFLRLSG
RLLNSVRIVP TTLWRHLGDE IGITAVELAS LRALYVRGRT LFDHQQLACD VLGFHWMTEH
QRRALVRTLR DEVARCADRD QLLVFARRWL YQSKILILRD RDIRVLVTAA LGQLEEETAK
TIAASVLPEQ LVRWRDAMAA LRPDGQTQQS WLWSAPAKHS TKQIGEVFER IELLYALNVH
KHLDDLSGLI VRRYARRLAS RPPSVGARIK EPARTVEVGC FLRHCLFTST DQAILMVQRR
VADLWRTVAA GVTETVNWAD LYKTLLAELA GLVAQGELQD AELRARIVAL LSASQQGKPP
SRASVVRERL FDAIRPVRSL LAEITKLPWQ ANSEHPVTTA LAQLTKLYAG KLRELPADVS
APRLGSVWSG AIAGADRERA FRALEVATLF SLRRAVRNGS VWIEHSLSFR GRARLFFTDA
RWQEEAKRHY ARLSLPANAS TLLKPLLAKV RAGVEAVAVA ARSGVLRVDE ELHLSVLPAE
DEDPEVIKLR AKLDLRIGEV QLPEVILAVD AQVRFSWIML GREPRSTEEL LMVYAGIMAH
GTSLTAAECA RMIPQLSATS IRQAMRWAGD ERRLSQACHA VLEFMQRHPI AATWGRTDLA
SSDMMSMETT QRVWQARQDP RRNTSSIGIY SHVRDRWGIF YAQPFVLNER QAGVAIEGVV
RQESIETSQL AVDTHGYTDF AMALARLLGF DLCPRLKELK QRHLYVPRGT IIPPEIAAVC
EATVDTALIE KHWDTLVHLA ASVMSGNASA VAALARFGSA ARGDPIYEAG VQLGRLLRTA
FLADYFVKDA FRNELRRVLN RGEAVNALKR AIYTGRVSPA QAKRAEEMQA VADALSLLAN
IIMAWNTTQM QAVLDRWANR RQVIPAELTG KIAPTRLQGI NLRGVFRFPV ERYASEILPS
QTTPKTGTGG
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