Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0553 |
Symbol | |
ID | 8018179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 585060 |
End bp | 585584 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829332 |
Product | protein of unknown function DUF477 |
Protein accession | YP_002980530 |
Protein GI | 241662170 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.468513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCA CGACCCGACA TCACCACGGC GCGCGCCGTG CCCTGACCCA TCTGCTGACA ACCTCGTCGC ATGCAAGGCG GGCGTTTCCG CCGGCGGATC TGCAAAAGCT TGAAGCCGCC GTGCGCGAAG GCGAACAACA CCATCGCGGC GAAGTGCGCG TCGTCATCGA GAGCTCGTTG CCCGTGCGCG ACGCCTGGGC CGGGATGTCG CCGCGGCACC GTGCCCGGAC GTTGTTCGGG CTGCTGGAGG TGTGGAACAC GCGCGAGCAC GTGGGCGTGC TGCTCTACAT CAACCTGGCC GACCACGCGG TCGAGATCCT GGCCGACCAC GGTATCGCCG CCAAGGTGGA CGCACACGCG TGGCGCGCCA TCTGCGAGAC CATCACGCGT GGCTTTGCGC AGCGCGTGAC CATGGCGCCG GTGCTCGACG CGCTGGCGCA GATCAACGAC CTCCTCGCCG CGCACGTGCC TTCCGATGGC ACGCCGCGCA CCAATGAGCT GAGCGACCGG CCGGTCGTGC AGTAA
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Protein sequence | MASTTRHHHG ARRALTHLLT TSSHARRAFP PADLQKLEAA VREGEQHHRG EVRVVIESSL PVRDAWAGMS PRHRARTLFG LLEVWNTREH VGVLLYINLA DHAVEILADH GIAAKVDAHA WRAICETITR GFAQRVTMAP VLDALAQIND LLAAHVPSDG TPRTNELSDR PVVQ
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