Gene Rpic12D_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0553 
Symbol 
ID8018179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp585060 
End bp585584 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID644829332 
Productprotein of unknown function DUF477 
Protein accessionYP_002980530 
Protein GI241662170 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.468513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA CGACCCGACA TCACCACGGC GCGCGCCGTG CCCTGACCCA TCTGCTGACA 
ACCTCGTCGC ATGCAAGGCG GGCGTTTCCG CCGGCGGATC TGCAAAAGCT TGAAGCCGCC
GTGCGCGAAG GCGAACAACA CCATCGCGGC GAAGTGCGCG TCGTCATCGA GAGCTCGTTG
CCCGTGCGCG ACGCCTGGGC CGGGATGTCG CCGCGGCACC GTGCCCGGAC GTTGTTCGGG
CTGCTGGAGG TGTGGAACAC GCGCGAGCAC GTGGGCGTGC TGCTCTACAT CAACCTGGCC
GACCACGCGG TCGAGATCCT GGCCGACCAC GGTATCGCCG CCAAGGTGGA CGCACACGCG
TGGCGCGCCA TCTGCGAGAC CATCACGCGT GGCTTTGCGC AGCGCGTGAC CATGGCGCCG
GTGCTCGACG CGCTGGCGCA GATCAACGAC CTCCTCGCCG CGCACGTGCC TTCCGATGGC
ACGCCGCGCA CCAATGAGCT GAGCGACCGG CCGGTCGTGC AGTAA
 
Protein sequence
MASTTRHHHG ARRALTHLLT TSSHARRAFP PADLQKLEAA VREGEQHHRG EVRVVIESSL 
PVRDAWAGMS PRHRARTLFG LLEVWNTREH VGVLLYINLA DHAVEILADH GIAAKVDAHA
WRAICETITR GFAQRVTMAP VLDALAQIND LLAAHVPSDG TPRTNELSDR PVVQ