| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0509 |
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| Symbol | |
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| ID | 8018135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 537756 |
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| End bp | 539987 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829289 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002980487 |
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| Protein GI | 241662127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.368087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGC CGCTGTTTAA CGCATCCGCT CGATTCAAAG GTTTTTTCAT GATTCCCTTC
CAGCCCCGCA AGCTGGTGAT GGCGCTTGCC GCCGTCCTGC CGTCCGTCGC CTCGGTTTCC
GCCCTGGCTC AGGAGGCCAC ACCGCCGGCC GCCGCGCCTT CCACGCCCGC CACGACGGCA
CCCGCCACCA ACGTGCGCGA CCTCAGCGAA ACCCGCGTCA CGGCCAAGCG CCTGGACGCC
GCACGCAATG CGCTGTCGCC GGACACCGGC AGCTCCGTCT ACAAGTTCGA CACCGATGAC
ATCGACCGCC TGCCGCTGGG CGATGCCACG CCGCTCAACC AGGTGCTGCT GCAGGCGCCG
GGCGTGGTGC AGGATTCGTA CGGGCAACTG CACGTGCGCG GAGACCATTC GAACCTTCAG
TACCGCATCA ATGGCGTGAT CGTGCCTGAG CCGATCAGCG GTTTCGGGCA GATGCTCGAT
ACGCGCTTCG CCAACCAGAT CAACGTGCTG ACCGGTGCGC TGCCAGCGCA GTACGGCTAC
CGCACCGCCG GCATCGTCGA CATCACCACC AAAGGCGCAT CGACCGACGA GGATGGCGAG
CCGAAGGCCT TTGGCGGCGA GATCGGCACG GTGCTGGGCA GCAATGCCAC GCACGAGGTC
AATGCGCAGA TCCAGGGCAC GAAAGACCGC TTCAGCTATT ACCTGTCAGG CGTGTTTGCC
GAAAACAACA TGGGCATTGA AAACCCGACG GGCAACCGCA ACGCCACGCA CGACCACACC
ACGCAAAACA AGTCGTTCGG CATGCTGTCG TACCTGCTCG ATAGCGATAG CCGCGTGAGC
TTCATGTTCG GCACGTCGAA CGGCCGTTTC CAGATTCCGA CGCGCCCGGG CCTGGCGCCG
AAATTCACCC TTGATGGCGC AGTGCCGCCG GCGTCGGAGG CGCTCAACGC CAATCAGCGC
GAGAAGACCG ACTTCCAGAT CCTGACGTAT CAGCAGAAGG TGTCGCCCAA GCTCGACTAC
CAGGTGTCGG TGTTCCGCCG CGCAAGCCGC ATCGACTACA TGCCGGATCC GATCGGGGAC
TTGGTCTACA ACGGCGTGGC CGCCGACATC ACGCGCCGCA ACGAGGCTTA CGGCCTGCAG
GGCGATGCGA GCTACAAGCT GACCGACAAG CACACGCTGC GTGCCGGCGT GTTCGTCCAG
CGCGAGCGCT ATGTGGCCGA CAACACCGCC AGCGTGTTTG CCGCCGACAG CTCCGGTGCG
CAGACCAGCA CCACGCCGTT CACCATCGTC GACAACCACA GCGGCAGCGG CACGACCCTG
GGCGTCTACC TGCAGGACGA ATGGAAGCCC ACCGACAAGC TCACCGTCAA CTACGGCGCG
CGCTACGACC GCGTCAACAC CATCGTCAGC GAGCAGCAAC TGAGCCCGCG CCTTGGCCTG
ACGTACGACC TGACGCCGCG CACCCGCGTG CATGCCGGCT ACGCGCGCTA CTTCACGCCG
CCGCCCACGG AGAAGTTCGA CACCACGTCG GTGCAGGCGT TTGCGGGCAC GACCAACGCG
TTGCCGTCGG ATGCCAACAC GGCCGTCAAG TCGGAGCGCT CGAACTACTT TGATCTCGGG
ATTTCGCACC AGCTCACGCC GCATCTCACG TTGGGCCTGG ATGCGTATTA CCGCGACGTG
CGCCACCTGC AGGACGAAGG GCAGTTCGGC AACGCGCTAC TGTACTCGGC GTTCAACTAC
GAGCGTGGCC GCATCTACGG CCTGGAAGGC AGCGCGAACT ATCGCAACGG CAACTTCGGG
GCCTACCTGA ACCTGGCGGT GTCGCGCGCG CAGGGCAAGG GCATCGAGAC CGGCCAGTTC
AACTTTGGTG CCGACGAGTT GGCCTACATC AACAACCATT GGGTCAACCT CGATCACGAC
CAGCGCCTGA CCGCGTCGGC AGGCGTGTCG TATCGGTATT CGGGCACAAC GTATACGAGC
GACGTGCTGT TCGGAACGGG CTTGCGCAAC GGCTTTGCCA ACACGGAGCA CCTGCCTGCC
TACTGGCAGA TGAACCTGGG CGCCGCCCGC GACTTCACCC TGCCGACGCT GGGCAAGTTC
AAGACGCGGC TGACCGTGCT GAACATCTTC GACCGCAGCT ACCAGTTGCG CGACGGCACG
GGCATCGGCG TGGGGGCGCC GCAGTTTGCG CCGCGCCGTA CGTTCCTGTT GTCGGTCAGC
AAGCCGTTCT AA
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| Protein sequence | MRVPLFNASA RFKGFFMIPF QPRKLVMALA AVLPSVASVS ALAQEATPPA AAPSTPATTA
PATNVRDLSE TRVTAKRLDA ARNALSPDTG SSVYKFDTDD IDRLPLGDAT PLNQVLLQAP
GVVQDSYGQL HVRGDHSNLQ YRINGVIVPE PISGFGQMLD TRFANQINVL TGALPAQYGY
RTAGIVDITT KGASTDEDGE PKAFGGEIGT VLGSNATHEV NAQIQGTKDR FSYYLSGVFA
ENNMGIENPT GNRNATHDHT TQNKSFGMLS YLLDSDSRVS FMFGTSNGRF QIPTRPGLAP
KFTLDGAVPP ASEALNANQR EKTDFQILTY QQKVSPKLDY QVSVFRRASR IDYMPDPIGD
LVYNGVAADI TRRNEAYGLQ GDASYKLTDK HTLRAGVFVQ RERYVADNTA SVFAADSSGA
QTSTTPFTIV DNHSGSGTTL GVYLQDEWKP TDKLTVNYGA RYDRVNTIVS EQQLSPRLGL
TYDLTPRTRV HAGYARYFTP PPTEKFDTTS VQAFAGTTNA LPSDANTAVK SERSNYFDLG
ISHQLTPHLT LGLDAYYRDV RHLQDEGQFG NALLYSAFNY ERGRIYGLEG SANYRNGNFG
AYLNLAVSRA QGKGIETGQF NFGADELAYI NNHWVNLDHD QRLTASAGVS YRYSGTTYTS
DVLFGTGLRN GFANTEHLPA YWQMNLGAAR DFTLPTLGKF KTRLTVLNIF DRSYQLRDGT
GIGVGAPQFA PRRTFLLSVS KPF
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