Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0400 |
Symbol | |
ID | 8018025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 415754 |
End bp | 417142 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829179 |
Product | peptidase M24 |
Protein accession | YP_002980378 |
Protein GI | 241662018 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.429272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CCGAACTCGC TTTCCTCCAG ACCTATCGCC AGCGCCGCGA ACGCGTCGTG CAGTGGCTGC GCACTGCATC GGGTAGTCGT GGCGGAGTCG CCATCGTGCC GACCGCGCCC GAAGCGATGC GCAACCGCGA CAGCGACTAC CCCTACCGGC ACGACAGCTA CTTCTATTAC CTGACCGGCT TTACCGAGCC CGAAGCGGTG CTCGCCATCG TGGTGCCCGC GGGCAACGCG CCGGCGCGCA GCGTGCTGTT CTGCCGCCCA AAGCATGAGG AGCGCGAAAT CTGGGACGGC TTCCGCTTCG GCCCGGAAGC CGCGAAGGAC GCCTTCGGCC TGGATGAGGG GCACTCGGTG GAAGACATTG ATGCGACGCT GCCCAAGTTA CTCGCCAATG CCGGTGCCGT GGCCTATCCG CTCGCCGAGA GCAGTGCGTT CGACCGCCGC ATGCGCCGCT GGCTCGATGC AGTGCGCATG CAAGGCCGCG CGGGGGTGTC GTCGCCGCAC CAGGCCCTGG ACGTGCGCGC CATCCTCGAT GAGATGCGGC TGTTCAAGGA CGCAAGCGAA CTCGACATCA TGCGCCGTGC CGGACGCATC TCTGCCGGGG CGCACGTGCG CGCCATGCAG GCGTCGCGTG CCGGGCTGCG TGAATACCAT CTCGAAGCGG AACTGCTATA CGAATTCCGC CGCCACGGCG CGCAGAGCGT TGCCTACAAC TCCATCGTGG CGACGGGCCC GAACGCGTGC GTACTGCACT ACCGCGCCGG CAATGCAGAA CTGCGCGACG GCGATCTCTG CCTGATCGAT GCCGGCTGTG AACTGGATGG CTACGCGTCA GACATCACCC GCACGTTCCC GGTCAATGGC CGCTTCACCG GCCCGCAACG CGAACTGTAT GAGCTTGTGG TGGCCGCGCA GGAAGCCGCC CTTGCGCAGA CGCGCCCCGG CGTGCCTTAC AACGTGCCGC ACGATGCCGC CACCCGCGTG CTGGCCCAAG GCATGCTCGA CACCGGCCTG CTCGACGCAA ACAAGGTCGG CACGCTCGAT GACGTGATCG CCGGCGGCCA ATACCGTCAG TTCTACATGC ACCGCACCGG CCACTGGCTC GGCATGGACG TGCACGACGT GGGGGAATAC CGCACGCCCG GCACCGTTGC CCCGGCTGAA GGCGAACGCC CGTGGCGCCC GCTGGAAGCC GGCATGGTGC TGACCGTCGA ACCCGGGATC TACGTGCGCC CCGCGCCCGG CGTGCCGGAA CAGTATTGGC ACATCGGCAT CCGCATTGAA GACGACGCCA TCGTCACGCC CGAAGGGTGC GAAATCATCA CGCGCGACGT GCCGGTGGCC CCAGACGAAA TCGAACTGGT GATGCGGAGC CGCGCATGA
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Protein sequence | MSATELAFLQ TYRQRRERVV QWLRTASGSR GGVAIVPTAP EAMRNRDSDY PYRHDSYFYY LTGFTEPEAV LAIVVPAGNA PARSVLFCRP KHEEREIWDG FRFGPEAAKD AFGLDEGHSV EDIDATLPKL LANAGAVAYP LAESSAFDRR MRRWLDAVRM QGRAGVSSPH QALDVRAILD EMRLFKDASE LDIMRRAGRI SAGAHVRAMQ ASRAGLREYH LEAELLYEFR RHGAQSVAYN SIVATGPNAC VLHYRAGNAE LRDGDLCLID AGCELDGYAS DITRTFPVNG RFTGPQRELY ELVVAAQEAA LAQTRPGVPY NVPHDAATRV LAQGMLDTGL LDANKVGTLD DVIAGGQYRQ FYMHRTGHWL GMDVHDVGEY RTPGTVAPAE GERPWRPLEA GMVLTVEPGI YVRPAPGVPE QYWHIGIRIE DDAIVTPEGC EIITRDVPVA PDEIELVMRS RA
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