Gene Rpic12D_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0358 
SymbolntpA 
ID8017982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp371847 
End bp372332 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID644829137 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_002980336 
Protein GI241661976 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA AGATCCCCGT CTCCGTTCTG GTCGTCATTC ACACGCCCGA CTTGCATGTG 
TTGGTGATGG AGCGGGCAGA TCATCCGGGC TTCTGGCAAT CCGTGACAGG CAGCTGCGAC
GCCCTCGACG AACCGCTGGC CGACACCGCC CGTCGGGAGG TGCTCGAAGA AACCGGCATC
GATGCGGCCC AGCATCATCT GATCGACTGG GGTCACCAGA TCGAATACGA AATCTACCCG
CGCTGGCGGC ACCGGTACGC GCCAGGCGTG ACGCGCAACA CCGAGCATTG GTTCGGCCTG
CTGGTAAGCG GCAAGGTGCC CGTGCGCATG TCGCCGCGCG AGCATGTGCA GGCCGAATGG
CTGCCTTACG AAGATGCCGC CGCGCGGTGC TTCTCGCGCA GCAATGCCGA AGCCATCTTG
CAGTTGCCCG AACGCCTGGC TGCCTATCAT GCCCGTCAAG CGGCACTGAC AAAGGACCAA
GCCTGA
 
Protein sequence
MPHKIPVSVL VVIHTPDLHV LVMERADHPG FWQSVTGSCD ALDEPLADTA RREVLEETGI 
DAAQHHLIDW GHQIEYEIYP RWRHRYAPGV TRNTEHWFGL LVSGKVPVRM SPREHVQAEW
LPYEDAAARC FSRSNAEAIL QLPERLAAYH ARQAALTKDQ A