Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0345 |
Symbol | |
ID | 8017969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 357922 |
End bp | 358374 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644829124 |
Product | histidine triad (HIT) protein |
Protein accession | YP_002980323 |
Protein GI | 241661963 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.598088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.426855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTTG CGACGACCGG CGAGCGCGCG CCCGGCTGCG CCCTGTGCGA GGCGGACGGC GGCGAGCCCG TCTGGCGTAA TGCCAAGGCG CGGGTGGTGC TGGTCGAGCA CGCGCGCTTC CCCGGCTTCT GCCGCGTCAT CTGGAACGAT CACGTGGCCG AGCAGACCGA CTTGTCCGAC GCAGATCGCC ACTGGCTGAT GGACGTCGTC AGCCGGGTTG AGCGCGTGCT GCGGGCCGAA CTGGCGCCCG ACAAGATCAA CCTCGCCAGC TTCGGCAATT TCGTGCCGCA TCTGCATTGG CACGTCATCC CGCGCTATCG TTGGGACACG CATTTTCCAG AGGCCGTCTG GGGCCCCGAG CAGCGCGCCC CTGATACCGC GCGCATGGCC GAGATCACGG CCAGGTTGCC GGCACTGTCG TACGCGCTGC ACGCGGCGCT GGCCAACGCT TGA
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Protein sequence | MTVATTGERA PGCALCEADG GEPVWRNAKA RVVLVEHARF PGFCRVIWND HVAEQTDLSD ADRHWLMDVV SRVERVLRAE LAPDKINLAS FGNFVPHLHW HVIPRYRWDT HFPEAVWGPE QRAPDTARMA EITARLPALS YALHAALANA
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