Gene Rpic12D_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0345 
Symbol 
ID8017969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp357922 
End bp358374 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID644829124 
Producthistidine triad (HIT) protein 
Protein accessionYP_002980323 
Protein GI241661963 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.598088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.426855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTTG CGACGACCGG CGAGCGCGCG CCCGGCTGCG CCCTGTGCGA GGCGGACGGC 
GGCGAGCCCG TCTGGCGTAA TGCCAAGGCG CGGGTGGTGC TGGTCGAGCA CGCGCGCTTC
CCCGGCTTCT GCCGCGTCAT CTGGAACGAT CACGTGGCCG AGCAGACCGA CTTGTCCGAC
GCAGATCGCC ACTGGCTGAT GGACGTCGTC AGCCGGGTTG AGCGCGTGCT GCGGGCCGAA
CTGGCGCCCG ACAAGATCAA CCTCGCCAGC TTCGGCAATT TCGTGCCGCA TCTGCATTGG
CACGTCATCC CGCGCTATCG TTGGGACACG CATTTTCCAG AGGCCGTCTG GGGCCCCGAG
CAGCGCGCCC CTGATACCGC GCGCATGGCC GAGATCACGG CCAGGTTGCC GGCACTGTCG
TACGCGCTGC ACGCGGCGCT GGCCAACGCT TGA
 
Protein sequence
MTVATTGERA PGCALCEADG GEPVWRNAKA RVVLVEHARF PGFCRVIWND HVAEQTDLSD 
ADRHWLMDVV SRVERVLRAE LAPDKINLAS FGNFVPHLHW HVIPRYRWDT HFPEAVWGPE
QRAPDTARMA EITARLPALS YALHAALANA