Gene Rpic12D_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0324 
Symbol 
ID8017948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp334100 
End bp334678 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID644829103 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002980302 
Protein GI241661942 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAA GCAAGCGCCA ACAGGTGGTG GACAAGGCCG GCGAGCTGTT TTCCCAGCAC 
GGCTTCCATC CCGTAGGCGT CGATTGGATC ATCGACGAGT CCGGCGTCGC CCGTATGACG
TTGTACCGCC ACTTTTCCGG TAAGGACGAT CTGATCAAGG AAGTGCTGGA GCAGCGATAT
ACGTATGTCA TGGGCGGCAT CGCCGCGAAG CTCAGCCCCA TGCCCGACGC CACTGCCCGC
TTGAAGGGTA TCTTCGACTG GTACGGCGCG TGGTTCCGTA CCCCGGAGTT TGCGGGTTGC
CTGTTCGAAC GCGCGCTGGC GGAGTTCGGC TCCACCTGCC CCAAGGTGAC CGACGTGGCC
GTGCGCTACC GCGACGACCT GCTCGCCATG ATGGAAACGC TGCTCAAGGA TGTGGTGCCC
GCCAAGACGG CACGGCAACT TGCGGGGGTG TACGTGATGC TGCTCTCGGG CGCCACGGCC
GACGCCCGCG CGATCGGCGA TCCATCCGTC GCGTCGCAAG CGTGGCACGC CGCCGAAACC
CTGCTGAACC AGGCCAAGGC CACCGTTGAA GCGGTCTGA
 
Protein sequence
MRASKRQQVV DKAGELFSQH GFHPVGVDWI IDESGVARMT LYRHFSGKDD LIKEVLEQRY 
TYVMGGIAAK LSPMPDATAR LKGIFDWYGA WFRTPEFAGC LFERALAEFG STCPKVTDVA
VRYRDDLLAM METLLKDVVP AKTARQLAGV YVMLLSGATA DARAIGDPSV ASQAWHAAET
LLNQAKATVE AV