Gene Rpic12D_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0198 
Symbol 
ID8017821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp208489 
End bp209028 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID644828980 
Productputative transmembrane protein 
Protein accessionYP_002980180 
Protein GI241661820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.751895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00509427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGTTTG GCGCGTTGGC GTGCGCGCTG CTGATGGCCT GTTCGCCCAA GTACGACTGG 
CGCACGGTCC ATTCCAGCGA GGGCGCCTAT GCCGTCGACT ACCCCGCCAA GCCCACCGCG
GAAGCGCGTC CCATCGTCAT CAACGGCCAG CGCGTGCCGA TGACGATGCA GGCCGCCAGC
GTCGACGGCA CGTTGTTCGC GGTCGGCGTG GTGGAGCTGC CCGCGGATGA TCCGGTATCG
CGGCAGCGCG CCGTTGAAGC GCTGCGCAGT GGCTTATCCG CCAATCTGAA GGGTCGTGTG
ACCGAGCGCG ACATCGCTGT GCAAACCGCC GCCCAGCCGC CTTTGTCATT GCCGGCAGTG
GAATTGATTG CCCAGGGGGC GGGCGGCGAC GATCCCGCCC CGCGCCGGCT GACCGCCCGC
GTGGTCGCCG TGGGCAAGCA TGCCTACCAG GCGGTCGTGC TGGAATCGGG CGACGCCGCT
CGCGATGCGC GCCAGCAGGA GCAGGTCGAC CAGTTTCTCT CCAGCTTCCA TCCGTATTAA
 
Protein sequence
MGFGALACAL LMACSPKYDW RTVHSSEGAY AVDYPAKPTA EARPIVINGQ RVPMTMQAAS 
VDGTLFAVGV VELPADDPVS RQRAVEALRS GLSANLKGRV TERDIAVQTA AQPPLSLPAV
ELIAQGAGGD DPAPRRLTAR VVAVGKHAYQ AVVLESGDAA RDARQQEQVD QFLSSFHPY