Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0198 |
Symbol | |
ID | 8017821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 208489 |
End bp | 209028 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644828980 |
Product | putative transmembrane protein |
Protein accession | YP_002980180 |
Protein GI | 241661820 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.751895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00509427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGGTTTG GCGCGTTGGC GTGCGCGCTG CTGATGGCCT GTTCGCCCAA GTACGACTGG CGCACGGTCC ATTCCAGCGA GGGCGCCTAT GCCGTCGACT ACCCCGCCAA GCCCACCGCG GAAGCGCGTC CCATCGTCAT CAACGGCCAG CGCGTGCCGA TGACGATGCA GGCCGCCAGC GTCGACGGCA CGTTGTTCGC GGTCGGCGTG GTGGAGCTGC CCGCGGATGA TCCGGTATCG CGGCAGCGCG CCGTTGAAGC GCTGCGCAGT GGCTTATCCG CCAATCTGAA GGGTCGTGTG ACCGAGCGCG ACATCGCTGT GCAAACCGCC GCCCAGCCGC CTTTGTCATT GCCGGCAGTG GAATTGATTG CCCAGGGGGC GGGCGGCGAC GATCCCGCCC CGCGCCGGCT GACCGCCCGC GTGGTCGCCG TGGGCAAGCA TGCCTACCAG GCGGTCGTGC TGGAATCGGG CGACGCCGCT CGCGATGCGC GCCAGCAGGA GCAGGTCGAC CAGTTTCTCT CCAGCTTCCA TCCGTATTAA
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Protein sequence | MGFGALACAL LMACSPKYDW RTVHSSEGAY AVDYPAKPTA EARPIVINGQ RVPMTMQAAS VDGTLFAVGV VELPADDPVS RQRAVEALRS GLSANLKGRV TERDIAVQTA AQPPLSLPAV ELIAQGAGGD DPAPRRLTAR VVAVGKHAYQ AVVLESGDAA RDARQQEQVD QFLSSFHPY
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