Gene Rpic12D_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0195 
Symbol 
ID8017818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp206319 
End bp207056 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID644828977 
Producthypothetical protein 
Protein accessionYP_002980177 
Protein GI241661817 
COG category[S] Function unknown 
COG ID[COG5634] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0377227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC ACTACTGCAT GTTCAAGGGC AAGCTGAAAT TCGGTGTGCC GTATCTGGAG 
GGCTACAACG GCAATCCGCA TTACGCGATC GTGGTGGAAG CGCCGGATGG GTCGGAATTC
GTGGTACTCG CCAACGTGAA ATCCGACTCG AGCATGCCGG GCGCCGGCGC CGCGGGTTAT
CACGTGCTGT ATCAGTGGAC GACGGATCTG GAGTTGCCGA TCACCGCCGA CCTTGCCGCG
CTGGCCCCCG GCCTGCACGA AAGCGGCTTC CCGCGTCTGG ACTACGTGCG CGACGCCGGG
CTGGTCGACT TCCCCCACAT GCAGCCGATC GCGCTGGATA CCGCGACTCA ACACAACGAC
ATCAACGCCC TCGTTGACGA CATGCTGAGC CTCGACCGCA CCACCACGCC CATCGACTAC
GTCTACCACG GCAGCTCCGG CGACGACGAC CGCAAAGGCT GGCCACCGCG TACCGACGTG
ACGGTCTACG GCTTTGGCTT CCTGTTCGAG CCGCAGCACA ACGGCCTGCA CGAAACGCAC
ATGAACCAGG GCAACCCCGT TGTCCACACG CCGGGTGTGA AGGACCATTC GCGCGAAAAC
GGCACACGGC AGGACGGGGC TGTCATCGTG GAAATCGACG GGAGGTTTCA GGCGCTGCTC
ATCGCATTCC AAACCCAGCG GATTCCGACA GACGACCGTG GATACCCGGT GGCGGATGCC
CATCCGATTC TGGGTTGA
 
Protein sequence
MANHYCMFKG KLKFGVPYLE GYNGNPHYAI VVEAPDGSEF VVLANVKSDS SMPGAGAAGY 
HVLYQWTTDL ELPITADLAA LAPGLHESGF PRLDYVRDAG LVDFPHMQPI ALDTATQHND
INALVDDMLS LDRTTTPIDY VYHGSSGDDD RKGWPPRTDV TVYGFGFLFE PQHNGLHETH
MNQGNPVVHT PGVKDHSREN GTRQDGAVIV EIDGRFQALL IAFQTQRIPT DDRGYPVADA
HPILG