Gene Rpic12D_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0183 
Symbol 
ID8017806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp194451 
End bp194912 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID644828965 
Producthypothetical protein 
Protein accessionYP_002980165 
Protein GI241661805 
COG category[S] Function unknown 
COG ID[COG5445] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.284235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.888623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC GTCTCGCAAC CGCTTTCTCC CGTAACGCTC TGCTGGTCCT GGTGGCCACG 
GTTTCCGCTT CCGCTGCGCT GCTGTCGGCC CAGCCCGCCG CTGCTGCCGT GCAAGGCCGC
GCCGATCCGT ACGCGCAAGG CGCTGTCGCC AAGGCCGACC CATACACACA GGGTGCAGCC
GCCAAGTACG ACGTCTACAC CCAAGGCGCG GACCGTCAAG CTGATACCTA CGGCTATCTG
TCGTGGAAGA ACGATCGCTT CGATCCGTAC ACCCAAGGTG CCGTCGGCAA GGCTGACCCC
TACACCGATG GCGCCATCGC CAAGGCTGAT CCGTACACCG ACGGCGCTGC TGCCAAGTAC
GACGTCTACA CGCAGGGTGC CGATCGCCAG GCCGACACCT ACGGCTATCT GTCGTGGAAC
GGCGATGCCT CGTATCCGAA GGACGCCGCT TCGCAAGCCT GA
 
Protein sequence
MNTRLATAFS RNALLVLVAT VSASAALLSA QPAAAAVQGR ADPYAQGAVA KADPYTQGAA 
AKYDVYTQGA DRQADTYGYL SWKNDRFDPY TQGAVGKADP YTDGAIAKAD PYTDGAAAKY
DVYTQGADRQ ADTYGYLSWN GDASYPKDAA SQA